Shewanella rhizosphaerae: K0I63_05975
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Entry
K0I63_05975 CDS
T09262
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs01501
beta-Lactam resistance
srhs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_05975
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I63_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
srhs03036
]
K0I63_05975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_05975
01504 Antimicrobial resistance genes [BR:
srhs01504
]
K0I63_05975
Chromosome and associated proteins [BR:
srhs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0I63_05975
Transporters [BR:
srhs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0I63_05975
Antimicrobial resistance genes [BR:
srhs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I63_05975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QYK14062
LinkDB
All DBs
Position
1343445..1344674
Genome browser
AA seq
409 aa
AA seq
DB search
MDKKYLYVPLGVLALAALLTFAVAANQAKNQSSTSQPQVVNGKAANANTANANTANVKAG
ARAVPIASARVEAHEVAQHLSLVGKLAANRSVQIAAEVSGKVQAINLSDNQAVSQGQVLV
HLEDAKAKANLVEAKAYLNDERRKLGEYKRLIEQHAITQTEIDAQLASVDIAEARLQAAQ
ADLDYHTLKAPFDGVIGLVDFSLGKLVSVGSELVSLDDLSSMRLDLQIPERYLSQIYLGM
PVVASSSAWPGEQFHGQVVAMAPRINSETLNLKVRVNFDNPSLLLRPGMLISARLDFAPV
TQAVVPVQALEYSGTKRFVYVIDSDNIARRTQVTLGARIDDQVLIDDGLSLGDRIVVKGL
VNMRDGIKVEDVETGQLAEGPGGRRLTQAQTQTQAQTQTGETEMARGQS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatacctgtacgttccccttggcgtgctggcgctagccgccttgctcacc
tttgctgttgctgccaatcaggccaagaatcagtcgtcaacatctcagccccaagttgta
aacggcaaagctgctaacgccaatacagctaatgccaacacagctaatgtcaaagctggg
gccagagccgtgccgattgccagtgcccgggtcgaggcccatgaagtggctcagcatctc
tcattggtgggcaagcttgccgccaatcgctcggtgcagatagctgccgaggtatcgggt
aaggtgcaggcgatcaacttaagcgacaatcaggcggtgtctcaggggcaggtattggtg
catctcgaagatgccaaggccaaggcaaatcttgtagaggccaaggcctatctgaacgat
gagcggcgcaagttaggcgagtacaagcggctcatagaacaacacgccattacccagacc
gagatagatgctcagctggccagtgtcgatatcgccgaggccaggctccaggccgctcag
gcggatctggattatcacaccctcaaggcccccttcgacggtgtgatcgggctggtggac
tttagtctgggcaagctggtgagcgtgggcagcgagctggtcagcctggacgatctctcc
agcatgcgtctggatctgcagatccccgagcgttatctgtcgcagatctacttgggcatg
cctgtggtggccagcagcagtgcctggccaggcgagcagtttcatggtcaggtggtggcc
atggcgccgcggatcaactccgagaccctcaatcttaaggtgagggtgaatttcgacaat
cccagccttctgctcaggccaggcatgttgatctcggcgcggcttgattttgcccctgta
actcaggcggtagtgccggttcaggcgctggaatactcaggcaccaaacgtttcgtctat
gtgatcgacagcgacaatatcgcccgccgcactcaggtgaccctgggggcacgtatcgat
gatcaggtgctgatcgatgatggcttatctttgggcgacagaatcgtggtcaaggggctg
gtcaatatgcgtgatggcatcaaggtggaagacgttgaaactggccagctcgccgagggg
ccgggaggcaggcgtttgactcaggctcagacccagacacaggcccagactcagacgggc
gagactgaaatggcgcgagggcagagctaa
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