Shewanella rhizosphaerae: K0I63_08440
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Entry
K0I63_08440 CDS
T09262
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs01501
beta-Lactam resistance
srhs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_08440
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I63_08440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_08440
01504 Antimicrobial resistance genes [BR:
srhs01504
]
K0I63_08440
Transporters [BR:
srhs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I63_08440
Antimicrobial resistance genes [BR:
srhs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I63_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK14492
LinkDB
All DBs
Position
complement(1869341..1872592)
Genome browser
AA seq
1083 aa
AA seq
DB search
MSIINTSVKRPVSVWMFMLAVILFGLVGFSRLAVKLLPDLSYPTITIRTQYEGAAPVEVE
QLVSKPIEEAAGIVKGLRKISSISRSGMSDVVLEFEWGTDMDMASLEVREKLDTIELPLD
VKKPLLLRFNPNLDPIVRLALSLPDADAQSLKQMRTFAEEELKRQLESLSGVAAVRLSGG
LEQEVHIQLNQEKLTQLNLNADKIRERIAAENINLSAGKVVQGEKEYLVRTLNQFNSLDE
LGQIIVYRDNQTLVRLFEVADIIDSHKERNDITRIGSAESIELAIYKEGDANTVAVARKV
TAKLNDLKKLNEKAELKVIYDQSEFIESAVSEVTSAALIGSLLSMLVIYLFLRDIVPTLI
ISISIPFSVIATFNMMYFADISLNIMSLGGIALAVGLLVDNAIVVLENIDRCRKLGMNKL
DAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGVAGALFSDQALTVTFALLASLLVALTT
IPMLASREGFKALPHLVQKREKPVLDTKLAKVKHYGATVCSFPFVLLFSYLPSLLLTLAL
MLSRAFSWLAGLIMRPISLAFNWCYNLLEGVYHKLLRKALKFTWVTLAIALTLTIGTMSL
IPRLGMELIPPMNQGEFYVEVLLPPGTEVSETDRVLQKLALSIKDREDVKHAYSQAGSGG
LMTSDTSRGGENWGRLQVVLADHQAFDAVTHVLRTTAMRIPELEAKIQHPELFSFKTPLE
IEVIGYDLTQLKQTADNLISALSDSDRFADLNTSLRDGQPELSIRFDHARLAALGMDAPT
VANRIAQRIGGTVASQYTVRDRKIDILVRSELEERDQISDIDSMIINPNSNQPIPLSAVA
DVSLNLGPSAINRISQQRVAIVSANLAYGDLNDAVLEARSIIDQQNLPSSIQVRFGGQNE
EMEHSFQSLQIALVLAVFLVYLVMASQFESLVHPLLILIAVPMAVGGSIFGLFITQTHLS
VVVFIGLIMLAGIVVNNAIVLVDRINQLREQGMAKLTAIEEAAKSRLRPIVMTTMTTALG
LAPMALGLGDGSEVRAPMAITVIFGLSLATLLTLVVIPALYALFDRKAFDAPSQEAAQQG
ESV
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataattaatacttccgttaaacggccggtatccgtgtggatgtttatgctggcg
gtgatcctgtttggcttggtgggtttctctcgcctggcggtgaaactcctgccggatctc
agctaccctaccatcaccatacgtacccaatatgaaggcgccgcgccggtcgaggtggag
cagcttgtctctaagcccatcgaagaggctgccggtatcgttaaggggctgcgtaagata
agctccatctcccgctctggcatgtctgatgtggtgctcgaatttgaatggggcacagac
atggacatggcaagcctcgaggtcagggaaaagctagacaccatagagctgcccctggat
gtgaaaaagccgctgttgctgcgctttaaccctaacctagatcctatagtgcgtctggcc
ctctccctgcccgacgccgacgctcagtcgctcaagcagatgcgcacctttgccgaggag
gagcttaagcgtcaactggaatccctcagcggcgtcgcggccgtcaggctctccggtggt
ctcgagcaagaggtacatattcagctaaaccaggagaagctgactcagcttaacctgaac
gccgacaagatccgcgagcgtatcgccgccgagaacatcaacctctctgccggtaaggtg
gtacagggcgagaaagagtatctggtgcgtaccctcaaccagttcaactccctggatgag
ttgggtcagatcatcgtctatcgcgacaaccagactctggtgcgtctgttcgaggtggcc
gacatcatcgacagccataaggaacgtaacgacatcacccgcatcggctctgccgagtct
atcgagctggccatctataaggaaggcgatgccaacacggtagccgtggcccgtaaagtc
accgctaaacttaacgacctcaagaagctaaacgagaaggctgagcttaaggttatctat
gatcaatcagagtttatcgagagcgcagtcagcgaggtcacctcggcggcgctgatcggt
agcttactctccatgctggtgatctacctattccttagggatatagtgccgaccctgatc
atctccatctcgattccgttttcggtgatcgccacttttaacatgatgtattttgccgac
atcagcctcaacatcatgtcgctaggcggtatcgccctggcggtggggctcctggtagac
aatgccatcgtggtgctggaaaacatcgaccgctgtcgcaagctgggaatgaacaagctc
gacgccgccgtgacaggcaccaaagaggtagccggcgctatcttcgcctctaccatgacc
acccttgcggtattcgtgccgctggtatttgtcgatggcgtggctggtgccctgttctcg
gatcaggcgctgacagtcaccttcgccctgttggcctcgctgctggtcgcgctgaccacc
atccctatgctggcatcgcgcgaaggcttcaaggctctgccgcacctggtgcagaaacgt
gaaaagccagtgctcgacactaaactggccaaggtgaagcattacggtgccaccgtctgc
tccttcccctttgtgctgctgtttagctatctgccgtcactgctgctgaccctagcattg
atgctgagccgcgccttttcatggcttgcgggcctcatcatgcggcccatcagcctggca
tttaactggtgctacaacctgctggaaggggtttatcacaagctgctacgcaaggcgctt
aagtttacctgggtgacactggccatcgccctcaccctcactataggcaccatgagcctg
atcccaagactcggcatggagctgatcccgccgatgaatcagggcgagttctatgtagaa
gtcctgctgccgccgggcacagaagtcagtgagacagacagagtgttacagaagctggcc
ttgtctatcaaagacagggaagatgtaaaacatgcctacagccaagccggtagcggcggt
ctgatgacctcagacacctcgcgcggcggcgaaaactggggccgtctgcaggtggtgctg
gccgatcatcaggccttcgatgcagtcacccatgtgctgcgcaccacagccatgcgtatt
cctgagctagaggcgaagatccaacatccagagctgtttagcttcaagaccccgcttgag
atcgaagtgataggctatgacttaactcagctaaaacagaccgccgataaccttatcagc
gcgctgtctgactcagatcgtttcgccgacctcaacaccagcctgcgtgacggtcagcca
gagctgagcatccgtttcgatcacgcccgccttgccgcccttggcatggacgcgccaacc
gtggcgaatcgtatcgcccagcgcatcggcggcacagtcgccagccaatatacagtgcgt
gacagaaagatcgacatcttggtgcgcagcgaactcgaggagcgcgaccagataagcgac
atcgattcgatgatcattaaccccaacagcaaccagcctatcccgctgagcgccgttgcc
gatgtctccttgaatctgggtccttctgccatcaaccgtatcagccagcagcgcgttgcc
atcgtctcggccaacctcgcctatggtgacctcaacgatgcggtgctcgaggcgagaagc
atcatagatcagcaaaatctgcctagctcgattcaggtgcgcttcggcggccagaacgaa
gagatggaacactccttccagtcgcttcagatcgccctggtattggccgtcttcctagta
tatctggtgatggccagccagttcgagtcgctggtacatccgctgcttatcctgatcgcc
gtacccatggcggttggcggcagcatcttcggcttgtttatcacccagactcacctgagc
gtggtggtattcatcggcctcatcatgctggcgggtatcgtagtgaacaacgccatcgtc
ctggtggatcgtatcaaccagctacgtgagcagggtatggctaaactgacggccatcgaa
gaagccgccaagtctcgtctgcgacccatcgtcatgaccaccatgaccacagctctgggt
ctggcgcctatggcactgggtttaggcgatggcagcgaggtacgggcgcccatggcgatc
acagtgatcttcggcttgtcacttgcaacactactgacgcttgtggtgatccctgcgctc
tacgccctgttcgatcgcaaggcgtttgacgcacctagtcaagaagctgcgcaacaggga
gaatcagtatga
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