Shewanella rhizosphaerae: K0I63_12645
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Entry
K0I63_12645 CDS
T09262
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
srhs
Shewanella rhizosphaerae
Pathway
srhs01501
beta-Lactam resistance
srhs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
srhs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I63_12645
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I63_12645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srhs02000
]
K0I63_12645
01504 Antimicrobial resistance genes [BR:
srhs01504
]
K0I63_12645
Transporters [BR:
srhs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I63_12645
Antimicrobial resistance genes [BR:
srhs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I63_12645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK11625
LinkDB
All DBs
Position
2869349..2872603
Genome browser
AA seq
1084 aa
AA seq
DB search
MNQQDRHQDNPHSPKRLGFSGRLAAMFQLSAITPLLALLGLLLGLFAVMVTPKEEEPQID
VTFADIYIPFPGATPSEVEHLVTQPMEEVISQIKGIDTLYSFSQPDGALIIAIFEVGIPR
NEAIVKLYNQVYSNKDKVASQAGVGEPQIKPRGIDDVPIVSLTLWSKDKAQSAEQLTHIA
KGLESELKRIPGTREIYSVGSHEISLNVRIDPAKMSFYGLTYDDINRSLSSNNHVSMPVS
LVQDNQEIKVQTGQFLKSKQEVEQLVVAVYQDESGQSAPVYLGDIAKISLNSDIPTQHAW
HGDKSAIYPAVTIAIGKQPGENAVDIANVILERLDKIDNILVPDDVNITVSRNYGKTAGD
KANTLILKLVFATSAVVILVFLTMGLRESVVVGIAIIITLAITLFASWAWGFTLNRISLF
ALIFSIGILVDDAIVVVENIHRHMALGKRSFVELIPVAVDEVGGPTILATFTVIAALMPM
AFVSGLMGPYMSPIPINASMGMLISLAIAFIVTPWLATKLLKGHQHQGGDGEHDVDDRML
RLFTRLISPFVRGKQAGKARIGLGAAIALLIMIAVSLPVGQLVVLKMLPFDNKSEFQVML
DMPEGTPVEQTQRVLKALAMELDKVEEVDNYQLYAGTAAPMNFNGLVRHYFLRQSQELGD
IQVNLVDKGDRDRDSHSIASEVRRALQATAKQYNANVKVVEVPPGPPVWSPILAEVYGPN
AEMRETAANALQQLFHDTQDVVDIDIYLPAAQQKWQVNIDRAKASLMGVPYSNIVDLVAT
SVGGKAVSYLHKPNQKSPVPIKLQLEEGAKVDLEQVLNLRLTNASGNSVPVSELITIHKR
AIDAPIIRKNMIPMIMVVADMAGPLDSPLYGMFEIAGSINQEGGLGFDQHYVNQPSGLDS
IAVLWDGEWKITYETFRDMGIAYGVGMIAIYLLVVGQFRSYSVPLIIMAPIPLTIIGVMP
GHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQETAAGVPFEQAVIHSGAVRAKPI
MLTGLAAMIGALFILDDPIFNGLAISLIFGILVSTLLTLVVIPVLYYAVMRHRPEYFAAV
NPQS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaagatcgacaccaagataatccgcacagcccaaaacgtctgggattttcc
gggcgcctggcggccatgttccagctgagcgccatcacccccttgctggccctgctcggc
ctgctgctgggtctgttcgccgtcatggtgaccccaaaagaggaagagccgcagatagat
gtcacctttgccgacatctacatccccttccccggcgccacgccgagcgaggtcgagcat
ctggtgacccagcccatggaggaggtgatctcgcagatcaagggaatagacaccctctac
tccttctcacaaccagacggcgcactgatcatcgccatcttcgaggtggggatcccacgt
aacgaggcgatcgtcaagctctacaatcaggtctattccaacaaggacaaggttgccagc
caggcaggcgtgggcgagccacagatcaagccccgcggcatcgacgatgtgcccatcgtc
agcctgaccctatggtcaaaagacaaggcgcaatctgccgagcagctgacccatatcgcc
aagggactggagagcgagctaaaacgcattccgggcacccgcgagatctacagcgtcggt
agtcatgagatcagcctcaacgtgcggatcgatcccgccaagatgagcttctatggcctc
acctacgacgatatcaaccgtagcctgtcgagcaataaccatgtctccatgccggtatct
ctggtgcaggataatcaggagatcaaggtacagactgggcagtttttaaaatctaaacaa
gaggttgagcagctggttgtcgccgtgtatcaggacgagtcaggccagagcgctcccgtg
tacctgggcgatatcgccaagattagcctcaacagtgacatcccgacccagcacgcctgg
cacggcgataagtcggccatctatcctgcggtcaccatcgccatcggcaagcagcccggc
gagaacgccgtggatatcgccaatgtgatcctcgagcgcctggataagatagacaacata
ctggtgcccgacgatgtcaacatcacggtctcgcgcaactatggtaagacggcgggcgac
aaggccaacaccctgatcctcaagctggtgtttgccacctcggccgtggtgatcttggtc
ttcctcaccatggggctacgtgagtctgtggtggtgggcatcgccatcatcatcaccctg
gcgatcaccctgtttgcctcctgggcctggggctttacccttaaccgtatatcattgttc
gccttgatcttctctatcggcatactggtagatgacgccatcgtggtggtggagaacatc
cacaggcatatggcgctgggcaaacgctccttcgtggagctgatccccgtcgccgtcgat
gaggtgggcggccccaccatattggcgacctttaccgtgatcgccgcgctgatgccgatg
gccttcgtatccggcctcatgggcccctacatgagccctatccccatcaacgccagcatg
gggatgctgatctccctggccatcgccttcatcgtcaccccctggctggccactaagctg
ctcaagggtcatcaacaccaaggtggtgatggtgaacatgacgtggacgatcgcatgctg
aggctgtttactaggctgatctcccccttcgtcagaggcaaacaggccggtaaggcgagg
attggactgggcgccgccatcgccctgctgatcatgatcgccgtctcgctgcccgtgggt
cagttagtggtactcaagatgctgcccttcgataacaagtcggagtttcaggtgatgctg
gatatgcctgaaggcacgccggttgaacagacccagcgcgtactcaaagccctggccatg
gagctggataaggtcgaagaggtggacaactaccagctctacgccggtaccgccgcgccg
atgaactttaatggtctggtgcgtcactacttcctcagacagagtcaggagctgggcgac
attcaggtcaatctggtcgataaaggcgatcgcgacagagacagccacagcatagcttcc
gaggtgcgccgcgcgctgcaggccaccgccaagcaatacaatgccaacgtcaaggtggtc
gaagtgccccctggcccacccgtgtggtcgcccatcctagccgaggtctatggccctaac
gcagagatgcgcgagacagcagccaatgctctgcagcagctgttccacgatacccaggat
gtggtggatatcgacatctacctgcccgccgcgcagcagaaatggcaggtcaatatagac
cgcgccaaggctagcttgatgggcgtgccctacagcaatatcgtcgatctggtggccacc
tcggtgggcggcaaggcggtgagctacctgcacaagccgaatcaaaagtcgcctgtacct
atcaagcttcagctggaagaaggtgccaaggtagatctcgagcaggtgcttaacctcagg
ctcaccaatgcctcgggtaactctgtgcccgtctctgagctgatcaccatacacaagcga
gccatagacgcgcctatcatacgcaagaacatgatcccaatgatcatggtggtcgccgac
atggccggcccgctggacagcccgctctatggcatgttcgagatcgccggcagcatcaat
caagagggtggtctgggcttcgatcaacactatgtcaaccaaccctcagggctggacagc
atagccgtgctctgggacggcgagtggaagatcacctatgagaccttcagagacatgggt
atcgcctatggcgtgggcatgatcgccatctacctcctggtggtgggtcagttccgctcc
tacagcgtgccgctgatcatcatggcgcctattccgctcaccatcataggggtgatgccg
ggccatgccctactgggggcacaatttaccgccacctctatgataggcatgatcgccctg
gcgggcattatcgtgcgtaactccatcctcttggtggactttattaatcaggaaaccgcc
gcgggtgtgcccttcgagcaggcggtgatccattctggcgccgtcagggccaagcccatc
atgttgacgggactggctgccatgataggtgccctgttcatcttagatgatccgatcttc
aacggcctagccatcagcctgatcttcggcatcttggtatcaaccctgttaaccctggtg
gtgatccccgtgctctattacgccgtgatgcgtcaccgccccgaatattttgccgcggtt
aatccgcaatcttaa
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