Serratia rhizosphaerae: FO014_02265
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Entry
FO014_02265 CDS
T07504
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
srhz
Serratia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
srhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srhz03009
]
FO014_02265 (rlmC)
Enzymes [BR:
srhz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
FO014_02265 (rlmC)
Ribosome biogenesis [BR:
srhz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FO014_02265 (rlmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QHA85894
LinkDB
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Position
complement(481908..483038)
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AA seq
376 aa
AA seq
DB search
MHCALYTAGSCRSCQWLEKPYPQQLADKQQHLQALLAEREVRQWLTPVAGALSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCACPLYPASFAPMFNVLKTFIARAGLTPYNVARKRG
ELKYLLLTESTGNGGVMLRFVLRSESKLAQLRAALPWLQQQLPQLQVISVNIQPVHMAIM
EGDREIILTEQQALEECFNQVPLYIRPQGFFQTNPQVAASLYATARDWVRELGIDSMWDL
FCGVGGFGLHCAQPETRLTGIEISAEAIRCARQSAATLGLQRVDFQALDSTRFATAEGDV
PQLVVVNPPRRGIGKELCDYLQRMAPDYLLYSSCNAQSMAQDMAQLPGYRVERVQLFDMF
PHTAHYEVLTLLVREK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcattgtatacggccggcagttgccgttcctgtcagtggctggaaaagcct
tatccgcagcagttggctgataaacagcagcatctgcaggccctgctggccgaacgcgag
gtcaggcagtggctgacgccggttgccggcgcgctgagcgcattccgcaataaggcgaaa
atggtggtcagcggcagcgtggagcgcccgctgctggggatgttgcaccgcgacggtacg
ccggtcgatctgtgcgcctgcccgctgtatcccgccagttttgcgccgatgttcaacgtg
ctgaaaacctttatcgctcgcgccgggctgacgccatacaacgtggcgcgcaaacgcggc
gagctgaaatatctgctgctgacggaaagcaccggtaacggcggggtgatgctgcgtttt
gttctgcgttcggagagcaaactggcgcagctgcgcgccgcgctgccgtggctgcagcaa
cagctgccgcagctgcaggtgatttccgtgaatattcagccggtgcatatggcgattatg
gagggcgatcgggaaatcatcctgaccgagcaacaggcgttggaagagtgcttcaaccag
gtgccgctgtatatccgcccgcagggctttttccagaccaatccgcaggtggcggcgtcg
ctgtatgccacggcgcgcgactgggtgcgtgagctgggcatcgacagcatgtgggatctg
ttctgcggcgtcggcggcttcggtttacactgcgcgcagccggaaacgcgtctgaccggg
attgagatcagcgcggaggcgattcgctgtgcgcgccagtcagcggcgacgctgggactg
cagcgggttgatttccaggcgctggactccacccgtttcgccacggcggaaggagacgtg
ccgcagctggtggtggtgaatccgccgcgacgcggcattggcaaggaactgtgcgattac
ctgcagcggatggcgccggactatctgctctattccagctgcaatgcacaaagcatggcg
caggatatggcgcagctgccggggtatcgggttgaacgggtgcagctgttcgatatgttc
ccgcataccgcgcactacgaggtgctgacgctgctggtgcgggagaagtaa
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