Serratia plymuthica 4Rx13: SOD_c15220
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Entry
SOD_c15220 CDS
T02710
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c15220 (rlmC)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SOD_c15220 (rlmC)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOD_c15220 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_11
Cons_hypoth95
Med12
Motif
Other DBs
NCBI-ProteinID:
AGO54507
LinkDB
All DBs
Position
1666119..1667246
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AA seq
375 aa
AA seq
DB search
MHCALYTAGTCRSCQWLEKPYPQQLTDKQHHLQSLLAGRDVAQWLEPLAGEQSAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLSACPLYPASFEPMFVVLKSFIARAGLTPYNVARKRG
ELKYLLLTESTHSGGVMLRFVLRSDSKLAQLRAALPWLQQQLPQLRVISANIQPVHMAIM
EGEREIPLTEQQALEEQFNQVPLYIRPQSFFQTNPQVAAKLYATARDWVRALGIDSMWDL
FCGVGGFGLHCAQPETRLTGIEISAEAIACARQSAETLGLQHVSFQALDSTRFATAEGSV
PQLVLVNPPRRGIGQALCDYLNQMAPGYILYSSCNAESMAKDIEGLPDYRIERVQLFDMF
PHTAHYEVLTLLVRH
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctttgtatacggcaggaacctgccgttcctgtcagtggctggaaaaacct
tatccgcagcaactgacggacaaacagcatcacctgcaatcgctgctggccgggcgtgat
gtcgcccagtggctggaaccgcttgccggcgagcagagcgcttttcgcaataaagccaaa
atggtggtcagcggcagcgtagagcgcccgctgctcggcatgctgcatcgcgacggcacg
ccggtcgatctgagtgcttgcccgttgtatcccgccagctttgaacccatgttcgtggtg
ttgaaaagctttatcgcccgcgccggcctgacgccgtataacgtggcgcgcaaacgtggc
gaattgaagtacctgttgttgaccgaaagcacccacagcggcggcgtaatgctgcgcttt
gtactgcgttcggatagcaaactggcgcaacttcgcgccgcgttgccgtggctgcagcaa
caattaccgcagctcagggtgatttccgccaatattcagccggtacatatggcgattatg
gaaggggagcgcgagatcccgctgaccgagcagcaggcgctggaggagcagtttaatcag
gtgccgctgtatatccgcccgcaaagcttcttccagaccaacccccaggtggcggccaaa
ttgtacgctactgcgcgcgactgggttagggcgctgggtatcgacagcatgtgggatctg
ttctgcggcgtgggtgggtttggcctgcactgcgcgcagccggaaacccggctcaccggc
attgaaatcagcgccgaagccatcgcttgcgcacgccagtcggcggaaacgttggggttg
cagcacgtcagtttccaggcgctggactccacgcgttttgccaccgctgaaggcagcgtg
ccgcaactggtgctggtcaatccgccacggcgcggtatcggccaggcgctgtgcgactac
ctgaaccagatggcgccaggctacattctgtattcaagctgtaatgccgagagcatggcg
aaagacattgaagggctgccggattatcgcatcgagcgtgtgcagctgttcgatatgttc
ccgcataccgcccattacgaagtgctgacgctgctggtgcgccattaa
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