Serratia plymuthica 4Rx13: SOD_c26320
Help
Entry
SOD_c26320 CDS
T02710
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00270
Cysteine and methionine metabolism
srl00450
Selenocompound metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01230
Biosynthesis of amino acids
Module
srl_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SOD_c26320 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SOD_c26320 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c26320 (patB)
Enzymes [BR:
srl01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SOD_c26320 (patB)
Amino acid related enzymes [BR:
srl01007
]
Aminotransferase (transaminase)
Class II
SOD_c26320 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AGO55605
LinkDB
All DBs
Position
2950597..2951748
Genome browser
AA seq
383 aa
AA seq
DB search
MAFNFDQWVDRSHSDSVKWDKYRDRDIIPLWVADTDFRSPPAIIDALQRRVAHGVFGYGH
PSPELIEVFTRRMVERYGWHIKPEWLIFLPGLVCGLNLCVRAFTAEGEGTLAPSPIYPPF
RKAAKFAGRPHLPVPLKLHDRRWLLDFDAIAGRLGGSEKLLLLCNPQNPGGTVYRREELS
QQHEFARSHDLIVCSDEIHCDLLLDPGCEHIPFATLNEDAAQRSITLMSPSKTFNIAGLG
ASMAVIPNAGLRQKLARARSGIVPEVDVLALVAAQAAYQDGQGWLDAQLAYLRANRDLVT
ERINAMPGLLLHPIEATYLAWIDCSQLATDNPHAFFEQAGVGLSAGLDFGDRRFVRLNFG
CRRELLTQALDRMMLATQALMPG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaattttgatcaatgggtagaccgtagtcacagtgacagcgttaagtgggat
aaatatcgcgaccgcgacatcattccgctttgggtcgccgacaccgacttccgctccccg
ccagcgatcatcgacgcattgcagcggcgcgtagcgcatggcgtgttcggttacggccat
ccatcccctgaacttattgaggtttttacccgccgcatggtagagcgctatggctggcac
atcaagcccgaatggctgattttcctgcccggtctggtctgtgggctgaatctgtgcgtc
cgcgcctttaccgccgagggtgaaggcactctggcgccgtcacccatctacccgccgttt
cgcaaagcggcgaaattcgccggacgcccgcatctgccggtgccgctcaagctgcacgac
cggcgttggctgctggatttcgacgcgatagcgggccggctcggcggcagcgaaaaattg
ctgttgctgtgcaacccgcaaaatccgggcggaaccgtctaccggcgggaggagttgtcg
caacagcatgaattcgcccgtagccatgatttgatcgtctgttcggatgaaattcattgt
gatctgttgcttgacccgggttgcgaacacatcccctttgccacgcttaatgaagacgca
gcccaacgcagcattacgttgatgtcgccatcgaaaaccttcaacattgccggattaggg
gcctcaatggcggtgattcccaacgccggcctgcgccaaaagttggcccgcgcgcgcagc
ggcatagttccggaagtcgacgtgctggcgttggtcgccgcacaagccgcctaccaggac
gggcaaggctggttggacgcccagttggcgtatctgcgcgccaaccgcgatttggtgacc
gaacgcattaacgccatgcccggcctgttgctgcacccgatagaagccacctatctggcc
tggatcgattgcagccaactggcgaccgacaatccacacgctttctttgaacaggccggg
gtgggcttaagcgcgggcctggatttcggcgaccgcaggtttgtacgtctgaatttcggc
tgccggcgcgaactgcttacgcaagcgctggaccgcatgatgctggccacccaagcgctg
atgcccggttaa
DBGET
integrated database retrieval system
