Serratia plymuthica 4Rx13: SOD_c42990
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Entry
SOD_c42990 CDS
T02710
Symbol
metH
Name
(GenBank) methionine synthase MetH
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00270
Cysteine and methionine metabolism
srl00450
Selenocompound metabolism
srl00670
One carbon pool by folate
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01230
Biosynthesis of amino acids
srl04981
Folate transport and metabolism
Module
srl_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SOD_c42990 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SOD_c42990 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SOD_c42990 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SOD_c42990 (metH)
04980 Cobalamin transport and metabolism
SOD_c42990 (metH)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
SOD_c42990 (metH)
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AGO57248
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Position
complement(4850364..4854074)
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AA seq
1236 aa
AA seq
DB search
MGWMAIEGVTVTNRVEQLRRQLAQRILVLDGGMGTMIQSYRLEESDFRGERFADWQSDLK
GNNDLLVLTKPEVITAIHYGYLEAGADILETNTFNSTTIAMADYHMESLSAEINYQAACL
ARACADEWTARTPDKPRYVAGVLGPTNRTASISPNVNDPAFRNVSFDELVEAYRESTRAL
VEGGVDLIMIETIFDTLNAKAAAFAVETEFEALGVELPIMISGTITDASGRTLSGQTTEA
FYNSMRHVKPLSFGLNCALGPDELRQYVAELSRISETYVTAHPNAGLPNAFGEYDLDAQE
MAKQVGEWAHAGFLNIIGGCCGTTPEHIAAMVDVVAGVPPRPLPDIPVACRLAGLEPLNI
DAKTLFVNVGERTNVTGSARFKRLIKEEKYNEALAVARQQVESGAQIIDINMDEGMLDAE
AAMVRFLSLIAGEPDIARVPIMIDSSKWSVIEKGLKCIQGKGIVNSISMKEGEEAFIHHA
KLVRRYGAAVVVMAFDEVGQADTRERKFEICRRAYKILTERVGFPPEDIIFDPNIFAVAT
GIEEHNNYAVDFIEACADIKTHLPHAMISGGVSNVSFSFRGNDPVREAIHAVFLYHAIRN
GMDMGIVNAGQLAIYDDLSDELRNAVEDVILNRRDDGTERLLDLAEKYRGSKDNEVAVQQ
AEWRGWPVEKRLEYSLVKGITEFIELDTEEARQRAERPIEVIEGPLMAGMNVVGDLFGEG
KMFLPQVVKSARVMKQAVAYLEPYIEASKQKGTTAGKILLATVKGDVHDIGKNIVGVVLQ
CNNYEIVDLGVMVPTEKILKTAREQNVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLL
IGGATTSKAHTAVKIEQNYSGSTTYVQNASRTVGVVSALLSDTQRDDFVARTRKEYETVR
IQHARKKPRTPPVSLQKARDNAMALDWENYRPPVPKQLGVHAVEAGIETLRQYIDWTPFF
MTWSLAGKYPRILEDEVVGEEAKRLFADANQMLDMLAANGSLNPRGVYGLFPANRVGDDI
EVYRDENRDEVLVVSRHLRQQTEKTDFPNYCLADFVAPKSSGKADYFGAFAVTGGLEEDE
LAAAYDAQHDDYNKIMIKALSDRLAEAFAEYLHEQVRKLHWGFAADENLSNEELIRENYQ
GIRPAPGYPACPEHTEKAEIWRLLDVNRHTGMELTESFAMWPGAAVSGWYFSHPESKYFA
VAQIQRDQVEDYAARKGMSTSEVERWLAPNLGYDAD
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggctggatggcaattgaaggggttacagtgacaaatcgagtagaacagctgcgccgg
cagttagcacagcgcattttagtgttggacggcggcatgggcaccatgatccagagctac
cggctggaagagagcgattttcgcggcgaacgttttgccgactggcagagcgatctgaaa
ggcaataacgacctgctggtgctgaccaagccggaagtgattaccgcgatccactacggt
tatctggaagcgggcgccgatattctcgaaaccaacaccttcaactccaccaccatcgcc
atggccgactaccacatggagtcgctgtcagccgagattaactatcaggccgcttgtctg
gcacgcgcctgcgccgacgaatggaccgcgcgcacgccggataaaccgcgctacgtggcc
ggggtgcttggcccgaccaaccgcaccgcttccatttcgccgaacgtcaacgatccggca
ttccgcaatgtctccttcgacgaactggtggaagcttaccgcgaatcaacgcgcgcgctg
gtggaaggcggcgtcgatctgatcatgatcgaaaccattttcgataccctgaacgccaaa
gcggccgcctttgcggtggaaaccgaattcgaagcgttgggcgtggagttgccgatcatg
atctccggcaccatcaccgacgcctccggccgaaccctgtccggccaaaccaccgaagcc
ttctataactcgatgcgccacgtcaagccgctgagttttggcctgaattgtgcgttgggg
ccggacgagctgcgtcaatacgttgccgagctgtcgcgcatctcggaaacctacgtcacc
gcacaccctaacgccggtttgcccaacgctttcggtgagtacgatctggacgcgcaagag
atggcgaaacaggtgggcgagtgggcgcatgccggtttcctcaatattatcggcggttgt
tgcggcaccacgccggagcatatcgccgcaatggtcgatgtggtggcgggcgtaccgccg
cgccccttgccggatatcccggtagcctgccgtttggccggccttgaaccgctgaatatc
gacgccaaaacgctgttcgtcaacgtcggtgaacggaccaacgtcaccggctctgcgcgc
ttcaaacggctgattaaagaagaaaaatataacgaagccttggccgtggcgcgccaacag
gtggaaagcggcgcgcagataatagatatcaacatggatgaagggatgctggacgccgaa
gcggcgatggtgcgttttctcagcctgattgccggcgagccggacatcgcccgggtgccg
atcatgatcgactcctccaaatggtcggtgatcgaaaaaggcctgaagtgcattcagggc
aaaggcatcgttaactccatctcgatgaaagaaggcgaagaggcctttattcaccatgcc
aaactggtgcgccgctacggcgcggcggtggtggtcatggcgtttgacgaggttggccag
gccgatacccgcgagcgcaagttcgagatctgtcgccgcgcctataaaattctgaccgaa
cgcgtcggcttcccgccggaagacattatttttgacccgaacatctttgccgtcgccacc
ggtatcgaagagcataacaactatgccgtcgactttatcgaggcctgcgccgacatcaaa
acccacctgccgcacgcgatgatctccggcggggtgtccaatgtgtcgttctcgttccgc
ggcaacgatccggtgcgcgaagcgatccacgcggtcttcctgtaccacgcgatccgcaac
ggcatggacatgggcatcgtcaacgccgggcaactggcgatctacgacgatctgagtgac
gaactgcgtaacgcggtggaggacgtgatcctcaaccgccgtgacgacggtaccgaacgc
ctgttggatctggcggaaaaatatcgcggcagcaaagacaacgaagtggcggtgcagcag
gcggaatggcgcggctggccggtggaaaagcggctggaatactcgctggtgaaaggcatt
accgagtttatcgagctggataccgaagaggcccgccagcgtgcggaacgcccgatcgaa
gtgatcgaagggccgctgatggcggggatgaacgtggtcggcgacctgttcggcgaaggc
aagatgttcctgccgcaggtggtgaagtccgcccgcgtgatgaagcaggcggtggcctat
ctggaaccctacatcgaggccagcaagcagaaaggcaccacggcgggcaaaatcctgctg
gcgacggtgaagggcgacgtgcatgacatcggcaaaaacatcgtcggcgtggtgttgcag
tgcaacaattacgaaatcgtcgatctgggcgtgatggtgccgacggagaaaatcctgaaa
accgcacgcgaacagaacgtggacatcatcggcttgtcggggctgatcaccccgtcgctg
gatgaaatggtcaacgtggcgaaagagatggagcgccagggctttaccctgccgctgctg
attggcggcgcgaccacttccaaagcgcataccgcggtgaagattgaacagaactacagc
ggctcgaccacctacgtgcaaaatgcctcccgtaccgtgggcgtagtgtcggcgttgctg
tccgatactcagcgcgacgattttgtggcgcgtacccgcaaagaatacgaaaccgtgcgt
atccagcatgcgcgcaaaaaaccgcgcaccccgccggtcagcctgcagaaagcgcgtgat
aacgccatggcgctggattgggaaaactaccggccgccggtgccgaagcagcttggggta
catgcggtggaggccggcatcgagacgctgcgccagtacatcgactggacaccgttcttt
atgacctggtcgctggcaggtaaatacccgcggattctggaagacgaggtggtgggggag
gaggccaagcgcctgttcgccgatgccaaccagatgctggatatgctggccgccaacggc
agcctcaacccgcgcggcgtctacggcctgttcccggccaaccgcgtcggcgacgacatc
gaggtgtatcgcgacgaaaaccgcgacgaggtgctggtggtcagccgtcacctgcgccag
cagaccgagaaaaccgacttcccgaactactgcctggcggacttcgtcgcgccgaaaagc
agcggcaaggccgactatttcggtgctttcgccgtaaccggcggtctggaagaggatgag
ctggcggcggcctatgatgcgcagcatgacgattacaataaaatcatgatcaaggcgttg
tccgatcgcctggcggaagctttcgccgagtacctgcatgagcaggtgcgtaaattgcac
tggggctttgccgctgacgagaacctgagcaacgaagagctgatacgcgagaattaccag
ggcatccgcccggcgccgggctacccggcctgcccggagcataccgagaaagcggagatc
tggcgcctgctggacgttaaccgccacaccggcatggagctgaccgaatccttcgccatg
tggccgggagcggcggtgtcgggctggtacttcagccatccggagagcaagtactttgcg
gtggcgcagatccagcgagatcaggtggaagactatgcggcgcgcaaaggcatgagcacc
agcgaagttgaacgctggctggcgcctaacctgggctacgacgccgactga
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