Salinibacter ruber M8: SRM_01356
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Entry
SRM_01356 CDS
T01209
Symbol
odhA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
srm
Salinibacter ruber M8
Pathway
srm00020
Citrate cycle (TCA cycle)
srm00630
Glyoxylate and dicarboxylate metabolism
srm00785
Lipoic acid metabolism
srm01100
Metabolic pathways
srm01110
Biosynthesis of secondary metabolites
srm01120
Microbial metabolism in diverse environments
srm01200
Carbon metabolism
srm01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SRM_01356 (odhA)
00630 Glyoxylate and dicarboxylate metabolism
SRM_01356 (odhA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SRM_01356 (odhA)
Enzymes [BR:
srm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SRM_01356 (odhA)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
SRM_01356 (odhA)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SRM_01356 (odhA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
SRM_01356 (odhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
2-oxoacid_dh
Transket_pyr
2-oxogl_dehyd_N
DUF7691
Motif
Other DBs
NCBI-ProteinID:
CBH24277
UniProt:
D5H8C2
LinkDB
All DBs
Position
complement(1538293..1542024)
Genome browser
AA seq
1243 aa
AA seq
DB search
MSSLGFNTGYIEELYKQYQDDPDSVSESWREFFADYDPDASFIPVDRTTAGDGEATTPPE
EPTEPEPTDRDSSPDASPAPPAEADDGVVEPLRPASAPAVDEDQADVTAMTGPSAKVVEN
MEDSLGIPTATSARTIPVKLLDENRNLLNDYQKQVGGEKVSYTHIIAYAMVQAMQKYPDM
NTTFRRNEDGTPEHVKPDQINLGLAIDVERRGERTLLVPNLKDAGSLSFAEFLGTYNNIV
GRALDGDLDLSDFQGTTATLTNPGMIGTSMSVARLMPGQGVIMGAGAIDFPPEYRGYDSE
VASKAGVSPVMTLTSTYDHRVIQGATSGAFLNHIEELLTGNHDFYQRIFSDLGVPYQPFR
MATDSTPQLGRSRPQDELDMTEKQAAVLQLIRAYRVRGHLQADINPLGYEWQYHEELDPA
TYGLTVWDLDREFITGGLGGEDKLPLREILSILRKSYTSKVGTAFMHISDPEEKTWIQNR
IEPMRNAGSPSEEERHRIVQKLNAAEAFERFLHTKYIGHKRFSLEGSETMIPLIDTLLSD
AADEGVEEVVMGMAHRGRLNVLANIIGKPYEEIFSKFEGNIDPNTTQGSGDVKYHLGAEG
DVTSPDGNEISVTLASNPSHLEAVNPVVEGMSRAKQNLLRDEHPEAAEDDYHDAVMPLLI
HGDAGFAGQGVVAETLNLSKLRGYTTGGTVHLVINNQIGFTTPPGDARSSTYATDLARAI
EAPIFHVNGDDPETCVRIARLAFEYRQRFNKDVVIDMMCYRVHGHNEGDEPTFTQPLLYE
KIEEKRSPRKLYTEMLLRRGEIEPDEAEQMLDDYRGRLQEAFERTKDLEEKDAEEALEER
VQRTADDRLPRVDTTAEREHLERVVEVLTDFPDDFNVHRKLERLFGKRDDLFYDEKRIDW
AFSETLAFGSLLQEGTRVRLSGQDSRRATFSQRHAVLIDQETGAEYTPLNNLTDDQERLL
IYDSLLSEYAVAGFEYGYSVVDKNALTCWEAQFGDFANGAEIVWDQFVSAAEEKWGQTSG
LVALLPHAYEGQGPEHSSARLERFLQLCAEQNMIVANFSTPANYFHALRRQVKRDVKKPL
IIMTPKSLLRHPKCVSTPEDLMEGGVQEIIPAEADPAGTTRHILCSGKVYYDLVTALEDS
DRRDEIAITRLEQFYPFPASDLQEELERYSEADETVWVQEEPQNMGAWSFVSPRFETLLD
EIHGPCEQRIQYVGRPASASPATGSAKVHDREQEQLVGDALGL
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcctcggattcaacacgggctacatcgaagagctctacaagcagtatcaggac
gaccccgacagcgtaagcgagagctggcgcgagttcttcgccgattatgacccggacgcc
tccttcatcccggtcgaccggaccaccgcgggcgacggggaggccaccacgccccccgaa
gaacccacggaaccggagccgacagatcgcgactcctcgcccgacgcgtccccggccccg
ccggcggaggccgacgacggcgtcgtggagcccctgcgccccgcctcggccccggcggtc
gacgaggaccaggccgacgtgacggccatgaccggcccgtcggcaaaggtcgtcgagaac
atggaagacagcctcggcatcccgacggccacctccgcccgtacgattccggtcaagctg
ctcgacgagaatcgcaacctcctgaacgactatcagaagcaggtcggtggcgagaaggtg
tcgtacacccacatcatcgcctacgcgatggtccaggcgatgcagaagtatcccgacatg
aacaccacgtttcggcgaaatgaggacggcacgccggagcacgtcaagcccgaccagatc
aacctggggctcgccattgacgtagagcggcggggcgagcggacgctcctggttcccaac
ctcaaggacgcaggcagcctcagcttcgccgagttcctcgggacctacaacaacatcgtt
ggccgcgcgctggacggcgacctcgacctgtccgactttcagggcaccacggccaccctc
accaacccgggcatgatcggcacgtcgatgagcgtggcgcgcctgatgcccggacagggc
gtcatcatgggggccggggccatcgacttcccgcccgagtaccgcgggtacgactcggaa
gtggcgagcaaggctggggtctccccggtcatgacgttgacctccacctacgaccaccgc
gtcattcagggcgccaccagcggggccttcctcaaccacattgaggagctcctgacaggt
aaccacgacttctaccagcggatcttctccgacctgggcgtgccctatcagccgttccgg
atggccaccgactccacgccgcagctcgggcggtctcggccccaggacgagctcgacatg
accgagaagcaggcggccgtccttcagctgattcgggcctaccgggtgcgcggccacctg
caggccgacatcaacccgctcggctacgagtggcagtaccacgaggagctcgaccccgcc
acctacggtctcacggtttgggacctggaccgggagttcatcaccggcggcctcgggggc
gaggacaagctgcccctgcgcgagattctctccatcctgcggaagtcctacaccagcaag
gtggggacggccttcatgcacatctccgaccccgaagagaagacgtggatccagaaccgg
atcgagccgatgcggaacgccggttcgccgtcggaggaggagcgccaccggattgtccag
aagctcaacgcggccgaggcgttcgagcgcttcctgcacaccaagtacatcggtcacaag
cgcttttcgctggaggggtcggagaccatgatccccctcatcgataccctcctctccgac
gccgccgacgagggcgtggaggaggtggtgatgggcatggcccaccgcggtcgcctcaac
gtgttggccaacatcatcggcaagccctacgaggagatcttctccaaattcgagggcaac
atcgaccccaacacgacccagggctcgggcgacgtgaagtaccacctgggggccgaaggg
gacgtgacctcgcccgacggcaacgagatttccgtgacgctcgcctcgaaccccagccac
ctggaggccgtcaacccggtcgtggagggcatgtcccgcgccaagcagaacctgctgcgc
gacgaacaccccgaggcggcggaggacgactaccacgacgccgtgatgcccctcctcatc
cacggcgacgccggcttcgccggacagggcgtggtggcggagaccctcaacctcagcaag
ctgcgcggttacacgaccggcggcaccgtccacctggtcatcaacaaccagatcggcttc
accacgccgcccggcgacgcccgcagctcgacctacgccaccgacctggcccgcgccatc
gaggcgcccatctttcacgtcaacggcgacgaccccgagacctgcgtccgcatcgcgcgg
ctggcgttcgagtaccgccagcgcttcaacaaggacgtggtgatcgacatgatgtgctac
cgcgttcacgggcacaacgagggcgacgagccgaccttcacacagccgctcctctacgag
aaaattgaggagaagcgctcgccgcgcaagctctacaccgagatgctgctccgacgcggc
gagattgagccggacgaggccgagcagatgctcgacgactaccggggccggctgcaggaa
gccttcgagcgcaccaaggacctggaggagaaggacgccgaggaggccctggaggagcgg
gtccagcgcacggccgacgatcgcctgccccgagtcgacaccacggccgagcgcgagcac
ctggaacgggtcgtggaggtcctcaccgacttcccggacgacttcaacgtccaccggaag
ctcgagcgcctgttcggcaagcgcgacgacctcttctacgacgagaagcgcatcgactgg
gccttctccgaaaccctggcgttcggctcgctgctgcaagagggcacgcgcgtccggctg
agcggacaggactcgcgccgcgccacctttagccagcggcacgccgtcctcattgatcaa
gagaccggtgcggagtacacgcccctcaacaacctgaccgacgaccaggagcggctcctc
atctacgacagcctcctttcggagtacgccgtggccgggttcgaatacggctactcggtg
gtggacaaaaacgccctcacctgctgggaggcccagtttggcgacttcgcgaacggggcg
gagatcgtgtgggaccagttcgtaagcgccgccgaggagaagtggggccagacctccggc
ctcgtggccctgctgccccacgcctacgaaggacagggcccggagcactcctcggcccgc
ttggagcgctttctgcagctctgtgcggagcagaacatgatcgtcgccaacttctccacg
ccggccaactactttcacgccctgcgccggcaggtgaagcgcgacgtcaagaaaccgctc
atcatcatgacgcccaagagcctgctgcgccacccgaagtgcgtctcgacgcccgaggac
ctcatggagggcggcgtgcaggagatcattccggccgaggcggaccctgcaggcaccacg
cggcacatcctctgcagtggcaaggtgtactacgacctcgtgacggcgttggaagactcc
gatcggcgcgacgagattgccatcacgcgactggagcagttctaccccttccccgcatcg
gacctgcaggaggagctggaacgctactctgaggccgacgagacggtgtgggtgcaggag
gagccccagaacatgggcgcctggtcgttcgtgtctccccgcttcgagacgctcctggac
gagattcacggcccctgcgagcagcgcatccagtacgtggggcggcccgccagtgccagt
cccgccaccggatcggccaaggtgcacgaccgggaacaggagcaactggttggggacgcc
cttggcctctaa
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