Salinibacter ruber M8: SRM_02577
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Entry
SRM_02577 CDS
T01209
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srm
Salinibacter ruber M8
Pathway
srm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRM_02577 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srm03400
]
SRM_02577 (nth)
Enzymes [BR:
srm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SRM_02577 (nth)
DNA repair and recombination proteins [BR:
srm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRM_02577 (nth)
Prokaryotic type
SRM_02577 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Zn_ribbon_PaaD
Zn_ribbon_8
DUF2400
Zn_ribbon_InsA
Methyltransf_13
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CBH25498
UniProt:
D5HBU3
LinkDB
All DBs
Position
complement(3009424..3010584)
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AA seq
386 aa
AA seq
DB search
MFWAGSWTRRALCPNMEYTGSPGRMVTIDTSDSAESRGGWAESGAAPPPSSSATPSAHRR
DRMETEGAMGHDVKHWANWSRLERSPAPWVQRADVIFEPAHPSPVGRSDRADVVLEELRE
RIDRPTTELQYDTPYQLLVAVILSAQCTDERVNKATPDLFDAYPTVEALAEATPDDIHPY
IQSITFPNNKAGYLARMARQVVDNFDGKVPETIDDLETLTGVGRKTARVVAQVAHDADAL
PVDTHVFRVANRIGLVKEDATTPKKVEQQLKRVIPKAEWGEAHHLLILHGRYTCTARSPD
CHDCPIHEECKHYGRLQRLPDPIDGLDSSAGTYYCTTSDHYFDDPETHVDRYDLEQVACP
RCGSMQVVRTSTGEPTKQVKDYRVNG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttctgggccgggtcgtggacgcggagggcgctgtgcccgaacatggagtacaccgga
tcgccgggcaggatggtcaccatcgacacctccgactccgccgaaagccggggcggctgg
gccgaaagcggggcggcccccccgccgagcagcagcgcgaccccgagcgcgcacaggagg
gatcggatggagacggaaggggccatggggcacgacgtgaagcactgggcaaattggtcg
cgcctcgaacgttcccccgccccatgggttcaacgcgcggatgtcatttttgaaccagcg
cacccttcccccgtgggacgatccgaccgtgccgacgttgttctcgaggaactccgcgag
cgcatcgaccgcccgacgaccgaactccagtacgacaccccatatcagctcctcgtcgcg
gtcatcctgtcggcccagtgcaccgacgagcgcgtcaacaaggcgacccccgatctcttc
gacgcgtacccgacggtggaggcccttgcggaggccacgcccgacgacatccacccctac
atccagtccatcaccttccccaacaacaaggccggctacctggcccggatggcccggcag
gtcgtcgacaattttgacgggaaggtgcccgagaccatcgacgacctggagaccctgacg
ggcgtgggccgcaagacggcccgtgtcgtggcgcaggtggcccacgacgccgacgcgctg
ccggtggacacccacgtcttccgcgtcgccaaccggatcggcctcgttaaggaggacgcc
acgacgcccaaaaaggtggagcaacagctcaagcgcgtcatccccaaggcggaatggggc
gaggcacatcatctgctcatcctgcacggccggtatacctgcacggcccgttcgccggac
tgccacgactgcccgatccacgaggagtgcaaacactacgggcgtctccagcgcctgccg
gaccccatcgacgggctggattcgtcggcggggacctactactgcaccaccagcgaccat
tacttcgacgaccccgagacgcacgtggatcgctacgacctcgaacaggtcgcgtgcccc
cgctgcggctccatgcaggtcgtccgcacctcgacgggcgagccgaccaagcaggtcaaa
gattatcgggtaaatgggtga
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