KEGG   PATHWAY: sro02010
Entry
sro02010                    Pathway                                
Name
ABC transporters - Streptosporangium roseum
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
sro02010  ABC transporters
sro02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptosporangium roseum [GN:sro]
Gene
Sros_0294  [KO:K10119]
Sros_0295  [KO:K10118]
Sros_0296  [KO:K10117]
Sros_0851  [KO:K23186]
Sros_0852  [KO:K23187]
Sros_0853  [KO:K25286]
Sros_0940  [KO:K15770]
Sros_0941  [KO:K15771]
Sros_0942  [KO:K15772]
Sros_0993  [KO:K02007]
Sros_0994  [KO:K02008]
Sros_0995  [KO:K02006]
Sros_1074  [KO:K02065]
Sros_1269  [KO:K07335]
Sros_1270  [KO:K23537]
Sros_1271  [KO:K23535]
Sros_1272  [KO:K23536]
Sros_1291  [KO:K17320]
Sros_1292  [KO:K17319]
Sros_1293  [KO:K17318]
Sros_1399  [KO:K10441] [EC:7.5.2.7]
Sros_1400  [KO:K10440]
Sros_1401  [KO:K10439]
Sros_1403  [KO:K06726] [EC:5.4.99.62]
Sros_1453  [KO:K09812]
Sros_1454  [KO:K09811]
Sros_1623  [KO:K10234]
Sros_1624  [KO:K10233]
Sros_1625  [KO:K10232]
Sros_1626  [KO:K10236]
Sros_1784  [KO:K25286]
Sros_1793  [KO:K02002]
Sros_1794  [KO:K02002]
Sros_1795  [KO:K02001]
Sros_1796  [KO:K02000] [EC:7.6.2.9]
Sros_1801  [KO:K11069]
Sros_1802  [KO:K11071]
Sros_1803  [KO:K11070]
Sros_1804  [KO:K11072] [EC:7.6.2.11]
Sros_1881  [KO:K11072] [EC:7.6.2.11]
Sros_1882  [KO:K11069]
Sros_1883  [KO:K11071]
Sros_1884  [KO:K11070]
Sros_1933  [KO:K09814] [EC:7.6.2.-]
Sros_1934  [KO:K09813]
Sros_1951  [KO:K13890]
Sros_1952  [KO:K13891]
Sros_1953  [KO:K13892]
Sros_1954  [KO:K13889]
Sros_1979  [KO:K01999]
Sros_1981  [KO:K01995]
Sros_2047  [KO:K10200]
Sros_2048  [KO:K10201]
Sros_2049  [KO:K10202]
Sros_2192  [KO:K17331]
Sros_2193  [KO:K17330]
Sros_2194  [KO:K17329]
Sros_2220  [KO:K10007]
Sros_2221  [KO:K10006]
Sros_2222  [KO:K10005]
Sros_2223  [KO:K10008] [EC:7.4.2.1]
Sros_2253  [KO:K10119]
Sros_2254  [KO:K10118]
Sros_2325  [KO:K11959]
Sros_2341  [KO:K09816]
Sros_2342  [KO:K09817] [EC:7.2.2.20]
Sros_2343  [KO:K09815]
Sros_2414  [KO:K10440]
Sros_2415  [KO:K10440]
Sros_2416  [KO:K10441] [EC:7.5.2.7]
Sros_2417  [KO:K10439]
Sros_2956  [KO:K01999]
Sros_2957  [KO:K01997]
Sros_2958  [KO:K01998]
Sros_2959  [KO:K01995]
Sros_2960  [KO:K01996]
Sros_3018  [KO:K02067]
Sros_3019  [KO:K02067]
Sros_3020  [KO:K02067]
Sros_3021  [KO:K02067]
Sros_3022  [KO:K02067]
Sros_3023  [KO:K02067]
Sros_3024  [KO:K02066]
Sros_3025  [KO:K02066]
Sros_3028  [KO:K01998]
Sros_3029  [KO:K01997]
Sros_3030  [KO:K01995]
Sros_3031  [KO:K01996]
Sros_3065  [KO:K15554]
Sros_3066  [KO:K15555] [EC:7.6.2.14]
Sros_3067  [KO:K15553]
Sros_3068  [KO:K23188]
Sros_3069  [KO:K23187]
Sros_3070  [KO:K23186]
Sros_3071  [KO:K25286]
Sros_3073  [KO:K17246]
Sros_3074  [KO:K17245]
Sros_3075  [KO:K17244]
Sros_3150  [KO:K15580]
Sros_3151  [KO:K15581]
Sros_3152  [KO:K15582]
Sros_3172  [KO:K15583]
Sros_3173  [KO:K10823]
Sros_3248  [KO:K02071]
Sros_3249  [KO:K02072]
Sros_3250  [KO:K02073]
Sros_3277  [KO:K16012]
Sros_3278  [KO:K16013]
Sros_3306  [KO:K10242]
Sros_3307  [KO:K10241]
Sros_3308  [KO:K10240]
Sros_3325  [KO:K15770]
Sros_3326  [KO:K15771]
Sros_3327  [KO:K15772]
Sros_3339  [KO:K15770]
Sros_3340  [KO:K15771]
Sros_3341  [KO:K15772]
Sros_3350  [KO:K10112] [EC:7.5.2.-]
Sros_3465  [KO:K23188]
Sros_3466  [KO:K23187]
Sros_3467  [KO:K23186]
Sros_3470  [KO:K25286]
Sros_3481  [KO:K09815]
Sros_3482  [KO:K09816]
Sros_3483  [KO:K09817] [EC:7.2.2.20]
Sros_3490  [KO:K10112] [EC:7.5.2.-]
Sros_4107  [KO:K18230]
Sros_4230  [KO:K25286]
Sros_4232  [KO:K23187]
Sros_4511  [KO:K14698] [EC:7.-.-.-]
Sros_4512  [KO:K14699] [EC:7.-.-.-]
Sros_4709  [KO:K01995]
Sros_4710  [KO:K01996]
Sros_4711  [KO:K01997]
Sros_4712  [KO:K01998]
Sros_4713  [KO:K01999]
Sros_4889  [KO:K10117]
Sros_4890  [KO:K10118]
Sros_4891  [KO:K10119]
Sros_4937  [KO:K18230]
Sros_5002  [KO:K17244]
Sros_5003  [KO:K17245]
Sros_5004  [KO:K17246]
Sros_5108  [KO:K25286]
Sros_5109  [KO:K23186]
Sros_5110  [KO:K23187]
Sros_5111  [KO:K23188]
Sros_5454  [KO:K03523]
Sros_5457  [KO:K16784] [EC:7.6.2.-]
Sros_5458  [KO:K16783]
Sros_5528  [KO:K10200]
Sros_5529  [KO:K10201]
Sros_5530  [KO:K10202]
Sros_5559  [KO:K02012]
Sros_5569  [KO:K02011]
Sros_5570  [KO:K02010] [EC:7.2.2.7]
Sros_5875  [KO:K10112] [EC:7.5.2.-]
Sros_5998  [KO:K01996]
Sros_5999  [KO:K01995]
Sros_6000  [KO:K01998]
Sros_6001  [KO:K01997]
Sros_6002  [KO:K01999]
Sros_6220  [KO:K23509]
Sros_6221  [KO:K23509]
Sros_6222  [KO:K10820] [EC:7.5.2.9]
Sros_6223  [KO:K23508]
Sros_6293  [KO:K10008] [EC:7.4.2.1]
Sros_6294  [KO:K10005]
Sros_6295  [KO:K10006]
Sros_6296  [KO:K10007]
Sros_6516  [KO:K10112] [EC:7.5.2.-]
Sros_6550  [KO:K10118]
Sros_6584  [KO:K10188]
Sros_6585  [KO:K10189]
Sros_6586  [KO:K10190]
Sros_6739  [KO:K10544]
Sros_6740  [KO:K10545] [EC:7.5.2.10]
Sros_6741  [KO:K10543]
Sros_6786  [KO:K18232]
Sros_6787  [KO:K18233]
Sros_6965  [KO:K05813]
Sros_7096  [KO:K13889]
Sros_7097  [KO:K13892]
Sros_7098  [KO:K13891]
Sros_7099  [KO:K13890]
Sros_7164  [KO:K10234]
Sros_7165  [KO:K10233]
Sros_7166  [KO:K10232]
Sros_7171  [KO:K10242]
Sros_7172  [KO:K10241]
Sros_7173  [KO:K10240]
Sros_7203  [KO:K13889]
Sros_7204  [KO:K13890]
Sros_7205  [KO:K13891]
Sros_7206  [KO:K13892]
Sros_7374  [KO:K15553]
Sros_7475  [KO:K10440]
Sros_7476  [KO:K10441] [EC:7.5.2.7]
Sros_7477  [KO:K10439]
Sros_7507  [KO:K01997]
Sros_7508  [KO:K01999]
Sros_7509  [KO:K01995 K01998]
Sros_7510  [KO:K01996]
Sros_7527  [KO:K18230]
Sros_7705  [KO:K10202]
Sros_7706  [KO:K10201]
Sros_7707  [KO:K10200]
Sros_7723  [KO:K17331]
Sros_7724  [KO:K17330]
Sros_7725  [KO:K17329]
Sros_7798  [KO:K15553]
Sros_7802  [KO:K15555] [EC:7.6.2.14]
Sros_7803  [KO:K15554]
Sros_7804  [KO:K15553]
Sros_7906  [KO:K02073]
Sros_7937  [KO:K17317]
Sros_7938  [KO:K17316]
Sros_7939  [KO:K17315]
Sros_7985  [KO:K25286]
Sros_7986  [KO:K23186]
Sros_7987  [KO:K23187]
Sros_7988  [KO:K23188]
Sros_8128  [KO:K02010] [EC:7.2.2.7]
Sros_8129  [KO:K02011]
Sros_8130  [KO:K02012]
Sros_8178  [KO:K05845]
Sros_8179  [KO:K05846]
Sros_8180  [KO:K05846]
Sros_8181  [KO:K05847] [EC:7.6.2.9]
Sros_8213  [KO:K10439]
Sros_8234  [KO:K10119]
Sros_8235  [KO:K10118]
Sros_8236  [KO:K10117]
Sros_8257  [KO:K10439]
Sros_8258  [KO:K10440]
Sros_8259  [KO:K10441] [EC:7.5.2.7]
Sros_8331  [KO:K02040]
Sros_8332  [KO:K02037]
Sros_8333  [KO:K02038]
Sros_8334  [KO:K02036] [EC:7.3.2.1]
Sros_8405  [KO:K03523]
Sros_8731  [KO:K10543]
Sros_8741  [KO:K18887]
Sros_8742  [KO:K18888]
Sros_8786  [KO:K16785]
Sros_8930  [KO:K10823]
Sros_8931  [KO:K15583]
Sros_8932  [KO:K15582]
Sros_8933  [KO:K15581]
Sros_8934  [KO:K15580]
Sros_8935  [KO:K09692]
Sros_8936  [KO:K09693] [EC:7.5.2.4]
Sros_9029  [KO:K02017] [EC:7.3.2.5]
Sros_9030  [KO:K02018]
Sros_9031  [KO:K02020]
Sros_9091  [KO:K17329]
Sros_9092  [KO:K17330]
Sros_9093  [KO:K17331]
Sros_9108  [KO:K01995]
Sros_9215  [KO:K09811]
Sros_9276  [KO:K15553]
Sros_9277  [KO:K15555] [EC:7.6.2.14]
Sros_9278  [KO:K15554]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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