Streptosporangium roseum: Sros_8077
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Entry
Sros_8077 CDS
T01137
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sro
Streptosporangium roseum
Pathway
sro03030
DNA replication
sro03410
Base excision repair
sro03420
Nucleotide excision repair
sro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sros_8077
03410 Base excision repair
Sros_8077
03420 Nucleotide excision repair
Sros_8077
03430 Mismatch repair
Sros_8077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sro03032
]
Sros_8077
03400 DNA repair and recombination proteins [BR:
sro03400
]
Sros_8077
Enzymes [BR:
sro01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Sros_8077
DNA replication proteins [BR:
sro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sros_8077
DNA repair and recombination proteins [BR:
sro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Sros_8077
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sros_8077
MMR (mismatch excision repair)
DNA ligase
Sros_8077
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Sros_8077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
BRCT_2
DUF7409
Motif
Other DBs
NCBI-ProteinID:
ACZ90732
UniProt:
D2AVT6
LinkDB
All DBs
Position
complement(8898533..8900713)
Genome browser
AA seq
726 aa
AA seq
DB search
MGAEVEGVPVAALDRHAELTELVEQANWRYHVLDSPTVSDAQYDTWMRELRGIEEEHPSL
RTPDSPTQKVGAPISSDFTPVAHLQRMESLDNAFNADDLASWQARAERLAERDPAPYLCE
LKIDGLAIALVYEKGRLVRGATRGDGRVGDDVTANVRTVAGVPHRLAGDDVPDLVEIRGE
VYMPVDGFVKLNEQLVAAGKAPFANPRNSAAGSLRMKDPRITAQRPLHLIVHGVGRWEGT
ALPRTQSGVYERLREFGLPVSDLYKVVDDLDGINAFIEFYREHRHDPAYEIDGVVVKVDR
IELQNNLGSTSRAPRWAIAYKYPPEEVNTKLLDIQVGVGRTGRVTPYGVMEPIVVAGSTV
ERATLHNGSEVARKGVRIGDTVVLRKAGDVIPEIVGPVVDLRDGTEREFTMPTHCPECGT
ALAYEKEGDADLRCPNTRACPAQLRERIFFAAGRRALDIEGLGYVAATALTQPLPPQEPP
VRTEADLFDLTIERLLPIRSVVRDPDTGLPKTDPETGDPKVVAFFANQSGEPSKNAEKML
EELEKAKDQPVWRVLVALSIRHVGPPTAQAIAAEFRSIDAIAAASEEELAAVEGVGPRVA
AAIRDWFEVDWHREIVDRWKAAGVRMEDEPPTDQLPQTLAGLTFVVTGTLEAFTRDEAGA
ALAARGGKVSSSVSKKTAFLVAGENAGSKFDKAVKLGVPILDEEGLRVLLAEGPEAAAGP
AVQPEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgaggtcgagggtgtgccggtggcggcgctggatcggcacgcggagctgacc
gagctggtcgagcaggccaactggcgctatcacgtgctcgactcgcccaccgtgagcgac
gcccagtacgacacgtggatgcgcgagctgcgcggcatcgaggaggagcacccgagcctg
cgcacgcccgactcgcccacgcagaaggtcggcgcgccgatctccagcgacttcacgccg
gtcgcccacctgcagcggatggagagcctggacaacgcgttcaacgccgacgatctcgcc
tcctggcaggcgcgggccgaacggctggccgagcgtgacccggccccctacctgtgcgag
ctgaagatcgacggcctggccatcgccctggtctacgagaagggccgcctggtccggggc
gcgacccggggcgacggacgcgtgggcgacgacgtgacggccaacgtgcgcaccgtcgcc
ggtgtgccgcaccgcctggccggtgacgacgtgcccgacctggtcgagatccggggcgag
gtctacatgcccgtcgacgggttcgtgaagctcaacgagcagctcgtcgcggcgggcaag
gcgccgttcgccaacccgcgcaactcggccgccggctcgctgcggatgaaggacccgcgg
atcaccgcgcagcgcccgctgcacctgatcgtgcacggcgtgggcaggtgggaggggacc
gccctgccccggacccagtccggggtctacgagcggctccgggagttcggcctgccggtc
agcgatctctacaaggtcgtcgacgacctcgacggcatcaacgccttcatcgagttctac
cgcgagcaccgccacgacccggcctacgagatcgacggcgtcgtggtgaaggtggaccgc
atcgagctccagaacaacctcggctccaccagccgggcgccccgctgggcgatcgcctac
aaatacccgcccgaggaggtcaacaccaagctcctggacatccaggtgggagtgggccgg
accggccgggtcacgccgtacggcgtcatggagccgatcgtcgtggccggttccacggtc
gagcgcgccacgctccacaacggctcggaggtcgctcgcaagggcgtgcgcatcggcgac
accgtggtgctgcgcaaggcgggcgacgtcatccccgagatcgtcgggccggtcgtggac
ctgcgtgacggcaccgagcgcgagttcacgatgccgacgcactgcccggagtgcggcacc
gcgctggcctacgagaaggagggcgacgccgacctgcgctgccccaacaccagggcgtgc
cccgcccagctccgcgagcggatcttcttcgccgccgggcgcagggccctcgacatcgag
ggcctgggctacgtggcggccaccgcgctgacccagccgctgccgccccaggagcccccg
gtccgcaccgaggccgacctgttcgacctgaccatcgagcggctgctgccgatccggtcg
gtcgtccgcgaccccgacaccggcctgcccaagaccgacccggagacgggcgatcccaag
gttgtcgccttcttcgccaaccagagcggcgagccgagcaagaacgccgagaagatgctg
gaggagctggagaaggccaaggaccagccggtctggcgggtcctggtcgcgctctccatc
cggcacgtcggaccgcccaccgcccaggccatcgccgccgagttccgctcgatcgacgcg
atcgcggccgcctcggaggaggagctcgccgccgtcgagggcgtcggcccccgggtggcc
gccgcgatccgcgactggttcgaggtcgactggcaccgggagatcgtcgaccggtggaag
gccgcgggggtccggatggaggacgagccgcccacggatcagctcccgcagaccctggcc
gggctcaccttcgtggtgaccggcacgctggaggccttcacccgcgacgaggcgggcgcg
gccctggcggcccggggcggcaaggtgtcgagttcggtgtcgaagaagaccgccttcctg
gtcgcgggcgagaacgccggatccaagttcgacaaggcggtcaagctcggcgtgccgatc
ctcgacgaggagggtctccgggtcctcctggccgaggggccggaggcggcggccgggccg
gcggtccagcccgaggagtga
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