Skermanella rosea: JL101_005020
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Entry
JL101_005020 CDS
T07666
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_005020
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_005020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_005020
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_005020
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_005020
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL101_005020
Transporters [BR:
sroe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL101_005020
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL101_005020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UEM04801
LinkDB
All DBs
Position
complement(1069107..1070327)
Genome browser
AA seq
406 aa
AA seq
DB search
MIFLPPPPPPDARAPNGGPRRRGVVRVVLAPLLAGAGLLLLAACGDGGEQQQGGAPQQPQ
QAVPVGVFEVRPEPVTLGETFVGRIEAIQRVELRARVTGFLEERLFREGQTVEQGTPLFR
IEPQLYEAVVEQRRADLARAEAEQENATVQLRRAQELVQRNNIPEATVDERQAAARTAEA
GVLQARAALRQAEIDLGYTEIRAPIAGRIGQALFDVGDLVSPESGALAELVTQDPIHVLF
QVSQRTLLEAQRAAGSRGLDPNRFVVRVLLPDGSEYQHQGTVNFVGITVSQQTDTVPVRA
EVPNPEGLLRDGQFVRVLIQPDEPELAITIPQAAVQADQQGNFVLGVDGENMVRIQRVET
GETLDQGRVVVRSGLKEGDRVVIQGIQQVRPGAPVDPSPVDADQGA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattttcctaccgccgccgccgccgcccgatgcgcgtgccccgaatggcggaccgcgc
cgccggggcgtcgtccgggtcgtcctcgcccctctcctggccggtgccggcctgctgctg
ctcgccgcctgcggcgacggcggcgagcagcagcagggcggtgccccgcagcaaccgcag
caggcggttcccgtcggcgtcttcgaggtcaggcccgagcccgtgaccctgggcgagacc
ttcgtcggccggatcgaggcgatccagcgggttgaactgagggcgcgtgtcaccggcttc
ctggaggagcggctgttccgcgagggccagaccgtcgaacagggcacgccgctgttccgg
atcgaacctcagctctacgaagcggtcgtcgagcagcgccgcgccgacctggcccgcgcc
gaggccgagcaggagaacgcgaccgtccagctccgccgcgcccaggaactggtccagcgc
aacaacatcccggaagccaccgtggatgagcggcaggccgccgcccgcaccgccgaggcc
ggcgtgctccaggcgagggcggcgctgcgccaggcggaaatcgacctcggctataccgag
atcagggcgccgatcgccgggcggattggacaggccctgttcgacgtcggggacctggtc
agcccggaatcgggcgccctggccgagctggtgacccaggatcccatccatgtcctgttc
caggtcagccagcgcaccctgctcgaagcccaacgggcggcgggatcccggggactggac
cccaaccgcttcgtcgtccgggtgctgctgcccgacggcagcgagtaccagcaccagggc
acggtgaatttcgtcggaatcacggtcagccagcagacggacacggtgccggtccgcgcc
gaggtgcccaaccccgagggcctgctgcgcgacggccagttcgtccgcgtcctgatccag
ccggacgaacccgagttggccatcacgatcccccaggccgccgtccaggccgaccagcag
ggcaacttcgtgctgggcgtggacggcgagaacatggtgcggatccagcgggtggaaacc
ggcgagaccctggaccagggccgggtcgtcgtccggtccggcctgaaggagggcgaccgg
gtggtcatccagggcatccagcaggtccgtcccggcgcacccgtggatcccagcccggtc
gacgccgaccagggggcgtga
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