Skermanella rosea: JL101_019800
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Entry
JL101_019800 CDS
T07666
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_019800
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_019800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_019800
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_019800
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_019800
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL101_019800
Transporters [BR:
sroe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL101_019800
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL101_019800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
BSH_CzcB
Beta-barrel_RND
BSH_YknX
Biotin_lipoyl
CzcB_C
RND-MFP_C
Beta-barrel_YknX
BSH_LcnD
HH_MFP_RND
SH3_20
DUF5804
HH_YBHG
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UEM02227
LinkDB
All DBs
Position
complement(4230679..4231767)
Genome browser
AA seq
362 aa
AA seq
DB search
MKLLARLFILVALLGLGGGAWWYFTVHQGADMPAAAQAPAGGGGPPGGIPVEAEQVEVGD
VSRTVTSVGTLFSDESVVIRPEVAGRITEIRFNEGERVRKGTVLLKLDDAIARATLEQAM
ASLNLSRTEADRADELYRQGSGSARARDQARAKLLADEASVSLAKAQLAKLDLTAPFDGV
LGLRRVSVGDVVQAGKDIVNLEAIDTLKLDFRVPELYLPSVRVGQTLAVTVDAVPGRSFA
GKVYAIDPLVDVNGRSINVRARVPNGDDALRPGLFARVTLTLTTRKDSILVPEQSLVAVG
ADQFVFKVSDGKVQRVKVRTGERRAAKVEILDGLLPGDLVVTAGHLKIRDGAPVTVVPPV
GS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcttgctcgcctgttcatccttgttgccctgctgggtctcggtggcggggcc
tggtggtacttcaccgtccaccagggcgccgacatgccggcggccgcccaggcgccggcc
ggcggcggtgggccgcccggcggcatcccggtggaggcggagcaggtcgaggtcggtgac
gtgtcgcgcaccgtgacctcggtcggaacgcttttttccgacgagtcggtcgtgatccgg
ccggaggtcgcgggacggatcacggagatccggttcaacgagggggagcgggtccgcaag
ggcaccgtcctgctcaagctcgacgacgccatcgcgcgggcgacgctggagcaggccatg
gccagcctcaatctcagcaggaccgaggcggaccgcgccgacgagctgtaccgccagggg
tcgggcagcgcccgtgcccgggaccaggcgcgcgccaagctgctggcggacgaggcctcc
gtgtcgctggcgaaggcccagctcgcgaagctggacctgacggcgccgttcgacggcgtg
ctcggcctgcgccgggtcagcgtcggcgacgtggtccaggccggcaaggacatcgtcaac
ctggaagccatcgacacgcttaagctggatttccgcgtgcccgagctctacctgccctcg
gtccgggtcggccagaccctggcggtcacggtcgacgcggtgccgggacgcagcttcgcc
ggcaaagtctacgcgatcgacccgctggtcgacgtcaatggccggagcatcaatgtccgc
gcccgcgtccccaacggcgacgacgcgctgcggcccggcctgttcgcccgcgtcaccctg
accctgacgacccgcaaggattcgatcctcgtgccggaacagtccctggtcgcggtcggg
gccgaccagttcgtcttcaaggtgtcggacggcaaggtccagcgggtcaaggtccgaacc
ggggagcgccgcgccgccaaggtcgagatcctggacgggctcctgccgggcgacctggtg
gtgaccgccgggcatctgaagatccgagacggcgcgccggtcaccgtggtccccccggtc
gggagctga
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integrated database retrieval system
