Skermanella rosea: JL101_023095
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Entry
JL101_023095 CDS
T07666
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_023095
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_023095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sroe03036
]
JL101_023095
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_023095
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_023095
Chromosome and associated proteins [BR:
sroe03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JL101_023095
Transporters [BR:
sroe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JL101_023095
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL101_023095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CzcB
Beta-barrel_RND_2
HH_YBHG
HH_EMRA
BSH_CusB
OEP
Glyco_hydro_46
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UEM02831
LinkDB
All DBs
Position
4934044..4935219
Genome browser
AA seq
391 aa
AA seq
DB search
MPFREPRAPSILSGPPLRKAVAAALTLLACPAALAQTGPAGGPPPAVTTVAVEARDVAPT
TEFIGRTEAIESFEARPRVEGFLREVAFRDGQDVTAGQLLYVIEPAPYEAALTAARAQLS
RAEANLLQARLSFERTEELRGRGNVSQAQLDEATAARDIAQAEVLAAQAQVQTAELNLGY
TRIASPIDGRIGVTAATQGNLVTPGTGALATVVRLDPIRVVFSVSDRDVLAIQEQYAGLS
PQEVVGRFVPRLRLADGSEYPQDGRVEFVDNRVDPATGTIAVRAVFPNPRQILLPGQFVT
ALVRPEQSERRPVVPVASVQQDREGRFVLVLDDQNRVSRRRIEVGTQIEQAFAVEQGLQE
GETVILGGVQKVQPGMTVQPSQASDAVAGQP
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccgttccgcgaaccccgtgctccgtcgatactctccgggcctcccctccggaaagcg
gtcgccgccgccctcaccctgctggcctgcccggctgccctggcgcagaccggaccggcc
ggcgggccgccgccggccgtcacgacggtcgcggtggaggcgcgcgacgtcgccccgacc
accgagttcatcgggcggaccgaggcgatcgagagcttcgaggcccgtcccagggtcgag
ggcttcctgcgcgaggtggctttccgggacgggcaggacgtcacggccggccagttgctc
tacgtgatcgagccggccccgtacgaggcggcgctgaccgccgcccgcgcccagctgtcg
cgggcggaagcaaacctgctccaggcccggctgagcttcgagcggaccgaggagctgcgc
gggcgcggcaatgtcagccaggcgcagctcgacgaggcgacggccgcgcgcgacatcgcc
caggccgaggtgctcgccgcgcaggcccaggtccagaccgcggagctgaacctgggctat
acccgcatcgcctcgccgatcgacggccgcatcggcgtgacggcggcgacccagggcaac
ctggtcacccccggcacgggggcgctcgccacggtcgtccgcctcgatccgatccgggtc
gtcttctcggtcagcgaccgcgacgtgctggcgatccaggagcagtatgccgggctgtcc
ccccaggaggtggtcggccggttcgtgcccaggctgcggctcgccgacggcagcgagtat
ccgcaggacggccgggtcgagttcgtcgacaaccgggtcgatccggcgaccggcacgatc
gcggtccgggcggtctttcccaatccgcggcagatcctgctgccgggccagttcgtgacc
gccctggtccggcccgagcagtcggagcgccggccggtggtgccggtcgcctcggtccag
caggaccgcgagggccggttcgtcctggtgctcgacgaccagaaccgggtcagccggcgc
cggatcgaggtggggacgcagatcgagcaggccttcgcggtcgaacaggggctccaggaa
ggcgagacggtcatcctgggcggcgtccagaaggtgcagccgggcatgaccgtgcagccg
tcgcaggcgtccgacgccgtggcggggcagccatga
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