Streptomyces roseirectus: IAG44_11575
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Entry
IAG44_11575 CDS
T07860
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sroi
Streptomyces roseirectus
Pathway
sroi03030
DNA replication
sroi03410
Base excision repair
sroi03420
Nucleotide excision repair
sroi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sroi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IAG44_11575 (ligA)
03410 Base excision repair
IAG44_11575 (ligA)
03420 Nucleotide excision repair
IAG44_11575 (ligA)
03430 Mismatch repair
IAG44_11575 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sroi03032
]
IAG44_11575 (ligA)
03400 DNA repair and recombination proteins [BR:
sroi03400
]
IAG44_11575 (ligA)
Enzymes [BR:
sroi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
IAG44_11575 (ligA)
DNA replication proteins [BR:
sroi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IAG44_11575 (ligA)
DNA repair and recombination proteins [BR:
sroi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
IAG44_11575 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IAG44_11575 (ligA)
MMR (mismatch excision repair)
DNA ligase
IAG44_11575 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IAG44_11575 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
HHH
DUF7069
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QNP70025
UniProt:
A0A7H0IB59
LinkDB
All DBs
Position
complement(2838459..2840633)
Genome browser
AA seq
724 aa
AA seq
DB search
MAGDKQTEARERHAQLAEQIEEHRFRYYVKDAPVISDAEFDTLLRSLEAVEDEFPELRTP
DSPTQKVAGAYETEFTSVEHRQRMLSLDNAFDDLELAAWAERVHKDVGTTVHHFLCELKV
DGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLAGERVPDLVEIRGEVYF
PMEKFAELNAQLVEAGDKPFANPRNAAAGSLRQKDPRKTASRPLHMVVHGIGALEGYDGL
TRLSEAYDLLKGWGLPTARHNKVVNDLDGVRQFIAHFGENRHSVEHEIDGVVVKLDEIPL
QGRLGSTSRAPRWAIAWKYAPEEVNTKLINIRVGVGRTGRVTPYAQVEPVTVAGSEVEFA
TLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGTERAFVMPAECPECGTPLR
PMKEADVDLRCPNARSCPAQLRERLFYLAGRKSLDIEHFGYVAAAALTKPLEPDTPPLLD
EGDLFDLTIDQLLPIKAYVLDQDSGLPKRDPKTGEEKIATVFANQQGEPKKNALAMLENI
AAAKERPLARVLTGLSIRHVGPVAAEALAREFRSIERIDQATEDELKDTDGVGPIVAAAV
KEWFAEDWHREILRKWKAAGVRMEDEHNGEDEGPRPLEGLTVVVTGTLEHHTRDGAKEAL
QTRGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLNEEGFAVLLEQGPEAAADAAL
PVEE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcgacaagcagaccgaggcccgggagcggcacgcgcagctcgcggagcagatc
gaggaacaccgcttccggtactacgtgaaggacgccccggtcatcagcgacgcggagttc
gacacgctcctgcgctccctggaggccgtggaggacgagttccccgagctgcgcacgccg
gattccccgacccagaaggtcgcgggcgcctacgagacggagttcacgtccgtcgaacac
cgccagcgcatgctgtccctggacaacgccttcgacgacctcgaactcgccgcctgggcc
gagcgcgtccacaaggacgtcggcaccaccgtccaccacttcctgtgcgagctgaaggtc
gacggcctcgccgtcaacctcacctacgaacacggccgcctcacgcgcgcggcgacgcgc
ggcgacggccgcacgggcgaggacatcacgcccaacgtccgcacgatcgccgagatcccc
gaccgcctcgcgggcgagcgcgtccccgacctcgtcgagatccggggcgaggtgtacttc
ccgatggagaagttcgccgagctgaacgcccagttggtcgaggccggcgacaagcccttc
gccaacccgcgcaacgcggcggccggttcgctccgccagaaggacccccgcaagaccgcc
tcccgcccgctgcacatggtcgtccacggcatcggcgccctggagggctacgacggcctc
acgcgcctgtccgaggcgtacgacctcctcaagggctggggcctgcccaccgcccgccac
aacaaggtcgtcaacgacctcgacggcgtacggcagttcatcgcccacttcggcgagaac
cgccactccgtggaacacgagatcgacggcgtcgtcgtcaagctcgacgagatccccctc
cagggccgcctcggctccacctcccgcgcgccccgctgggccatcgcctggaagtacgcg
cccgaggaggtcaacaccaagctgatcaacatccgcgtgggcgtgggccgcaccggccgc
gtcaccccgtacgcccaggtcgaaccggtcacggtcgccggctccgaggtcgagttcgcg
accctgcacaaccaggacgtcgtcaaggccaagggcgtcctcatcggggacacggtcgtg
ctgcgcaaggccggcgacgtcatcccggagatcctgggcccggtcgcggacctgcgtgac
ggcaccgagcgcgcgttcgtgatgcccgccgagtgccccgagtgcggcaccccgctgcgg
cccatgaaggaggcggacgtcgacctgcgctgccccaacgcccgcagttgcccggcccag
ttgcgcgagcgcctgttctacctcgcgggccgcaagtccctggacatcgagcacttcggg
tacgtcgcggcggccgccctcaccaagccgctggagcccgacaccccgcccctgctcgac
gagggcgacctcttcgacctcaccatcgaccagctcctgccgatcaaggcgtacgtcctc
gaccaggacagcgggctgcccaagcgcgacccgaagaccggcgaggagaagatcgcgacc
gtcttcgccaaccagcagggcgagccgaagaagaacgcgctcgcgatgctggagaacatc
gcggcggccaaggaacgccccctggcgcgcgtcctgacgggcctgtccatccggcacgtc
ggcccggtcgccgccgaggcgctggcgcgggagttccgctccatcgagcgcatcgaccag
gccaccgaggacgaactcaaggacacggacggcgtcggcccgatcgtcgccgccgccgtc
aaggagtggttcgccgaggactggcaccgcgagatcctgcgcaagtggaaggcggccggc
gtccgcatggaggacgagcacaacggcgaggacgagggcccgcgcccgctggagggcctg
accgtcgtcgtcaccggcaccctggagcaccacaccagagacggcgccaaggaggccctt
cagacgaggggagcaaaggtcaccggttcggtttcgaagaagacgtccttcgtggtcgtg
ggtgacaatcccggctccaagtacgacaaggcgatgcagctcaaggtgcccgtgctgaac
gaggagggcttcgccgtcctcctggagcagggccccgaggcggcggcggacgcggccctt
ccggtcgaggagtag
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integrated database retrieval system
