Streptomyces sp. RPA4-5: HEP86_11635
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Entry
HEP86_11635 CDS
T10325
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa00300
Lysine biosynthesis
srpa00550
Peptidoglycan biosynthesis
srpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HEP86_11635
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HEP86_11635
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
HEP86_11635
Enzymes [BR:
srpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HEP86_11635
Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
Precursor biosynthesis
Amino acid ligase
HEP86_11635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QIY55054
UniProt:
A0A6H1JWT4
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All DBs
Position
complement(2574542..2576320)
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AA seq
592 aa
AA seq
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MTTITPDGTPDGTPDGTPAPGNCSPPRPSLRPGPVVPGTLTAVSHADQSPKAQHAEKGGS
GTYPGAPRPERVRPTPLADLAEQLGCPAPDAGRPGAADAARPVMVTGITHDSRAVRPGDV
YAALPGARLHGADFVAQAADLGATAVLTDPSGAERAAATGLPVLVVDNPRARMGALAVSI
YGAPGEDLLQIGITGTSGKTTTAYLIEGGLRAAAAKVPDGGLTGLIGTVETRIGDERIKS
ERTTPEATDLQALFAVMRERGVRALAMEVSSHALVLGRVDGCVFDVAIFNNLSPEHMEFH
SGMEDYFQAKAQLFTKARSRAGVVNLDDEYGKRLAEGESEVPVTTFSAEGHPDADWRAAD
VEVGTLGSTFTVHGPDGVTLRAASPIAGPFNVANALAAIVSLVVAGIDAQTAADGVAAVP
GVPGRLERIDAGQPYLAVVDYAHKTDAVESVLRALRKVTDGKLHAVLGCGGDRDPHKRAP
MGAAVARLADTAVLTSDNPRGEDPLAILATMLAGAAEVPIHERGTVLVEEERAVAIAAAV
ARAEPGDTVIVAGKGHEQGQDIAGVVRPFDDRQVLREAIEASLKSPQPNHQG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccatcacccccgacggcacccccgacggcacccccgacggcacacccgctccc
ggaaactgctcccctccacggccctcacttcgccccgggccggtggtgcccggtacgctc
accgccgtgtcacacgctgatcagtccccgaaagcccagcacgccgagaagggcgggtcc
ggtacgtatccgggagccccgcgccctgaacgggtccgccccacccccctggcggacctc
gccgagcagctgggatgcccggccccggacgccggccgccccggagccgccgatgccgcg
cggcccgtgatggtcaccggcatcacccatgactcccgtgcggtccgccccggtgacgtc
tacgccgcgctgcccggtgcccgtctgcacggtgccgacttcgtcgcgcaggccgccgac
ctcggcgccacggcggtcctgaccgatccgtcgggtgccgagcgcgccgccgcgaccggt
ctgccggtcctcgtcgtcgacaacccgcgcgcgcggatgggcgccctggccgtctccatc
tacggagcgccgggcgaggatctcctccagatcggcatcaccggcacctccggcaagacc
accaccgcctacctcatcgagggcgggctgcgggccgccgcggccaaggtccccgacggc
gggctgaccgggctgatcggcaccgtcgagacccggatcggcgacgagcgcatcaagtcc
gagcgcacgacccccgaggccaccgacctccaggcgctgttcgcggtgatgcgcgagcgc
ggcgtgcgcgcgctggccatggaggtctccagccacgccctggtcctcggccgggtcgac
ggctgcgtcttcgacgtcgcgatcttcaacaacctcagcccggagcacatggagttccac
tccgggatggaggactacttccaggccaaggcccagctcttcaccaaggcccgcagccgc
gccggtgtcgtcaacctcgacgacgagtacggcaagcggctggccgagggcgagtccgag
gtcccggtcaccaccttctccgcggagggccaccccgacgccgactggcgggccgccgac
gtcgaggtcggcaccctcggctcgaccttcaccgtgcacggcccggacggcgtcaccctg
cgcgccgcgtccccgatcgccggcccgttcaacgtcgccaacgcgctcgccgcgatcgtc
tcgctggtcgtcgccgggatcgacgcacagaccgcggccgacggtgtcgccgcggtgccc
ggcgtccccggccgcctggagcgcatcgacgccggccagccgtacctcgcggtggtcgac
tacgcccacaagaccgacgccgtcgaatcggttctgcgcgcgctgcgcaaggtcaccgac
ggcaagctgcacgccgtcctcggctgcggcggcgaccgtgacccgcacaagcgcgccccc
atgggcgcggcggtggcccggctcgccgacacggccgtactgacctccgacaacccgcgc
ggcgaggaccccctcgcgatcctcgccaccatgctcgcgggcgccgcggaggtccccatc
catgaacgcggcacggtgctcgtcgaagaagagcgcgccgtcgccatcgccgccgccgtc
gcccgcgccgagcccggggacaccgtgatcgtcgcgggcaagggccacgagcagggccag
gacatcgccggagtggttcgccccttcgacgaccgccaggtactgcgcgaggccatcgag
gcttccttgaagtcaccgcagccgaaccaccagggatga
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