Streptomyces sp. RPA4-5: HEP86_13495
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Entry
HEP86_13495 CDS
T10325
Name
(GenBank) peptidase M15D vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa01502
Vancomycin resistance
srpa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEP86_13495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HEP86_13495
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srpa01002
]
HEP86_13495
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
HEP86_13495
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
srpa01504
]
HEP86_13495
Enzymes [BR:
srpa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
HEP86_13495
Peptidases and inhibitors [BR:
srpa01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
HEP86_13495
Peptidoglycan biosynthesis and degradation proteins [BR:
srpa01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
HEP86_13495
Antimicrobial resistance genes [BR:
srpa01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
HEP86_13495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CN_hydrolase
Peptidase_M15
VanY
DUF1265
Rv0078B
Motif
Other DBs
NCBI-ProteinID:
QIY55369
LinkDB
All DBs
Position
2982520..2983914
Genome browser
AA seq
464 aa
AA seq
DB search
MIIAAAQFLPVPGDIEANAARMAGLLTEAAGRGAGLVVFPELALTHYDLALIAADPVGMT
VTADDARLAPVREACRATGTAAVVNAAGRATGGGSRPAISSFVIGPDGALVTRYDKVHLF
GDENTVFAPGTAPGRCTLGGIRFALATCFDNSDPQVAARAAADGCRVSLASSFHGSAERV
AGYARQARDHGLQVLLANGMGTGGSASGCGLSGAWLPSGERVAAAAEWTGPVPGDGAELV
FTDVRDRITLMADPAVAAVPVEECGEPLVDVRTAAPALLVAEDRNDPLGAYAFLREGVLQ
RLLAAQKSLPDGLRWQFVEGYRPPGLQRRYFEEYADELRAAHPDWDAARLHQAASRYVSP
PEIAPHSAGGAVDLTLVTTEGAPVDMGTPINASPEESDGACYTAAPELTPVARAHRRVLN
AALTAAGLVNYPTEWWHWSYGDRYWALATGADHALYGPKELAGR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgctgccgcacaattcctcccggtgccgggcgatatcgaggccaacgccgcc
cggatggccgggctcctcaccgaggccgccgggcgcggcgcggggctggtggtcttcccc
gaactcgcgctgacgcactacgacctggccctgatagccgccgacccggtgggcatgacg
gtcacggcggacgacgcccggctggcacccgtacgggaggcctgccgggcgaccgggacc
gcggcggtcgtgaacgcggcgggccgcgccaccggcggcgggtcccgtccggccatctcc
tcgttcgtcatcggcccggacggcgccctggtcacccgctacgacaaggtccatctgttc
ggggacgagaacaccgtgttcgcgccgggcaccgcgccgggccgctgcaccctgggcggc
atccggttcgcgctggccacctgcttcgacaacagcgacccccaggtggcggcgcgggcc
gcggcggacggctgccgggtgtcgctcgccagctccttccacggctcggcggagcgggtg
gcgggatatgcgcggcaggcgcgggaccacggtctgcaggtgctgctcgccaacggcatg
gggaccggcggctcggcttcggggtgcggtctcagcggcgcctggctgccgtcgggcgag
cgggttgcggcggccgccgagtggaccggcccggtgccgggggacggtgcggagctggtg
ttcaccgatgtccgcgaccggatcacgctgatggcggacccggcggtggccgcggtcccc
gtcgaggagtgcggtgagccgctggtggacgtacggaccgcggcgcccgcgctgctcgtg
gccgaggaccggaacgacccgctcggcgcctatgccttcctgcgggagggcgtgctccaa
cggctgttggcggcgcagaagtcactgccggacgggctgcggtggcagttcgtcgagggc
taccggccgccggggctccagcgccgctacttcgaggagtacgcggacgaactgcgcgcc
gcccaccccgactgggacgccgcccggctccaccaggccgccagccgctatgtgtcaccg
cccgagatcgcaccgcacagcgcgggcggcgcggtggacctcaccctcgtcaccaccgag
ggggcacccgtcgacatgggcacgccgatcaatgcctcccccgaggagagcgacggcgcc
tgctacacggccgcgccggagctgacgcccgtcgcccgcgcccaccgccgggtactgaac
gccgcgctcaccgccgccggtctggtcaactacccgaccgagtggtggcactggtcctac
ggcgaccgctactgggcgctggcgaccggcgcggaccacgcgctgtacgggccgaaggag
ctggcggggcggtga
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