Streptomyces sp. RPA4-5: HEP86_22405
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Entry
HEP86_22405 CDS
T10325
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srpa Streptomyces sp. RPA4-5
Pathway
srpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEP86_22405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srpa03400
]
HEP86_22405 (nth)
Enzymes [BR:
srpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEP86_22405 (nth)
DNA repair and recombination proteins [BR:
srpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEP86_22405 (nth)
Prokaryotic type
HEP86_22405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HC2
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QIY56773
LinkDB
All DBs
Position
4995840..4996880
Genome browser
AA seq
346 aa
AA seq
DB search
MNATPEKPAAAKKAVTKKATAKKAVAKKATAVAGQAPAKKTAAGKTALAKKAPAKKSTAK
KATAKTPAKTAAGKTPAKTAAKKAPARKPESRVAMVRRARRINRELAELYPYAHPELDFT
NPFELLVATVLSAQTTDLRVNQTTPRLFAVCPTPEDMAAMPPEKLEELIRPTGFFRAKTK
SLIGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLARR
FGWTTAEDAEKVEADVAEIFPKSEWTMLSHRVVFHGRRVCHSRKPACGACAIAPLCPAYG
EGETDPEKARKLLKYELGGQPGQRLKPPADYPGRPAPPMAPPVAAS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcaacccccgagaagccggcggcggccaagaaggccgtcacgaagaaggccacc
gccaaaaaggctgtcgcgaagaaggccaccgcggtcgccgggcaggcccccgccaagaag
acggccgccgggaagaccgccctggccaagaaggcgcctgccaagaagtcgacggccaag
aaggcgacggcgaagacgcccgccaagacggccgccgggaagacgcccgccaagacggcc
gccaagaaggcgcccgcgcgcaagcccgagtcccgggtcgccatggtgcggcgggcccgc
cggatcaaccgcgagctggccgagctgtatccgtacgcccaccccgagctggacttcacc
aaccccttcgagctgctggtcgcgacggtcctgtccgcgcagaccaccgacctgagggtc
aaccagaccaccccgcgcctcttcgcggtctgcccgacgcccgaggacatggcggcgatg
cctccggagaagctggaggagctgatccggccgaccggcttcttccgggccaagacgaag
tcgctgatcggcctgtcggcggcgctccgcgaccgcttcggcggtgaggtcccgggccgc
ctggaggacctcgtcaccctccccggagtcggccgcaagaccgccaacgtggtgctgggc
aacgccttcggcgtcccgggtatcaccgtcgacacccacttcggccggctggcccgccgc
ttcggctggaccaccgccgaggacgccgagaaggtcgaggcggatgtcgccgagatcttc
cccaagagcgagtggacgatgctctcgcaccgcgtcgtcttccacggccgccgcgtctgc
cactcccgcaagcccgcctgcggagcctgcgccatcgccccgctgtgccccgcgtacggc
gagggcgagacggacccggagaaggccaggaagctgctgaagtacgagctgggcggccag
ccggggcagcgcctgaagccaccggccgactatccggggcggcccgcgccgccgatggcg
cccccggtggccgcgtcctga
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