Salinibacter ruber DSM 13855: SRU_2356
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Entry
SRU_2356 CDS
T00312
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SRU_2356 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_2356 (nth)
Enzymes [BR:
sru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SRU_2356 (nth)
DNA repair and recombination proteins [BR:
sru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SRU_2356 (nth)
Prokaryotic type
SRU_2356 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Zn_ribbon_PaaD
Zn_ribbon_8
DUF2400
Zn_ribbon_InsA
Methyltransf_13
Zn_ribbon_Com
RecR_HhH
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ABC45958
UniProt:
Q2S025
LinkDB
All DBs
Position
complement(2931905..2932879)
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AA seq
324 aa
AA seq
DB search
METEGAMGHDVKHWANWSRLERSPAPWVQRADVIFEPAHPSPVGRSDRADVVLEELRERI
DRPTTELQYDTPYQLLVAVILSAQCTDERVNKATPDLFDAYPAVEALAEATPDDIHPYIQ
SITFPNNKAGYLARMARQVVDNFDGKVPETIDDLETLTGVGRKTARVVAQVAHDADALPV
DTHVFRVANRIGLVKEDATTPKKVEQQLKRVIPKAEWGEAHHLLILHGRYTCTARSPDCH
DCPIHEECKHYDRLQRLPDPIDGLDSSAGTYYCTTSDHYFDDPETHVDRYDLEQVACPRC
GSMQVVRTSTGEPTKQVKDYRVNG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaaggggccatggggcacgacgtgaagcactgggcaaattggtcgcgcctc
gaacgttcccccgccccgtgggttcaacgcgcggatgtcatttttgaaccagcgcaccct
tcccccgtgggacgatccgaccgtgccgacgttgttctcgaggaactccgcgagcgcatc
gaccgcccgacgaccgaactccagtacgacaccccataccagctcctcgtcgcggtcatc
ctgtcggcccagtgcaccgacgagcgcgttaacaaggcgacccccgatctcttcgacgcg
tacccggcggtggaggcccttgcggaggccacgcccgacgacattcacccctacatccag
tccattaccttccccaacaacaaggccggctacctggcccggatggcccggcaggtcgtc
gacaattttgacgggaaggtgcccgagaccatcgacgacctggagaccctgacgggcgtg
ggccgcaagacggcccgtgtcgtggcgcaggtggcccacgacgccgacgcgctgccggtg
gacacccacgtcttccgcgtcgccaaccggatcggcctcgtcaaggaggacgccacgacg
cccaaaaaggtggagcaacagctcaagcgcgtcatccccaaggcggaatggggcgaggca
catcatctgctcatcctgcacggccggtatacctgcacggcccgctcgccggactgccac
gactgcccgatccacgaggagtgcaaacactacgaccgtctccagcgcctgccggacccc
atcgacgggctggattcgtcggcggggacctactactgcaccaccagcgaccattacttc
gacgaccccgagacgcacgtggatcgctacgacctcgaacaggtcgcgtgcccccgctgc
ggctccatgcaggtcgtccgcacctcgacgggcgagccgaccaagcaggtcaaggattat
cgggtaaatgggtga
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