Salinigranum rubrum: C2R22_05040
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Entry
C2R22_05040 CDS
T05289
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srub
Salinigranum rubrum
Pathway
srub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2R22_05040 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srub03400
]
C2R22_05040 (nth)
Enzymes [BR:
srub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C2R22_05040 (nth)
DNA repair and recombination proteins [BR:
srub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2R22_05040 (nth)
Prokaryotic type
C2R22_05040 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
Ribosomal_S13
Scm3
Motif
Other DBs
NCBI-ProteinID:
AUV81103
UniProt:
A0A2I8VGN9
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All DBs
Position
1057785..1058468
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AA seq
227 aa
AA seq
DB search
MGTPRDSREEQVTVVLDRLYEAYPDTTISLNFSNRLELLVAVVLSAQCTDERVNDVTETL
FEKYQTAEDYANADEAELADDIYGITFHNNKAGYLTSMGETLVEEHDGEVPDTMSALTDL
SGVGRKTANVVLQHGHDVVEGIVVDTHVRRLSRRLGLTAEETPEKIERDLMGVVPESDWQ
QFTHLLISHGRAVCDARNPSCDDCVLEDVCPSSKLDHDVDLASGEAW
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccccacgcgactccagggaggaacaggtcacggtcgtcctcgaccgtctgtac
gaggcgtaccccgacacgaccatctcgctgaacttctcgaatcgactcgaactgctcgtc
gccgtcgtcctctccgcgcagtgtacggacgagcgggtcaacgacgtcacggagacactg
ttcgagaagtaccagacggccgaggactacgcgaacgccgacgaggcggaactcgccgac
gacatctacggcatcacgttccacaacaacaaggcgggctacctcacgtcgatgggcgag
acgctggtcgaagaacacgacggcgaggtgcccgacaccatgtccgccctgaccgacctc
tcgggggtcggccgcaagacggcgaacgtcgtcctccagcacggccacgacgtcgtcgag
ggcatcgtcgtcgacacccacgtgaggcggctctcgcgccgactcggactcaccgccgag
gagacccccgaaaagatcgaacgcgacctcatgggcgtcgtccccgagtcggactggcag
cagttcacccacctgctcatcagccacggccgggcggtgtgtgacgcccgcaacccctcc
tgcgacgactgtgtgctggaggacgtctgtccgtcgtcgaaactcgaccacgacgtcgac
ctcgcgagcggcgaggcgtggtga
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