Streptomyces reticuli: TUE45_04827
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Entry
TUE45_04827 CDS
T04246
Symbol
pdg_2
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
srw
Streptomyces reticuli
Pathway
srw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TUE45_04827 (pdg_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srw03400
]
TUE45_04827 (pdg_2)
Enzymes [BR:
srw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TUE45_04827 (pdg_2)
DNA repair and recombination proteins [BR:
srw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TUE45_04827 (pdg_2)
Prokaryotic type
TUE45_04827 (pdg_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
CUW30108
LinkDB
All DBs
Position
I:5448488..5449336
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AA seq
282 aa
AA seq
DB search
MVSQRPETPLALKRRAFKINRILGETYPYAHCELDFRNAWELLVATVLSAQTTDLRVNQT
TPRLFAKYPKPADLAGADPMDVEELIKPTGFFRAKTRSITKMAAAIVHDHDGRVPGTLEE
MVKLPGVGRKTAFVVLGNACACEASVTADQAHGTKVCTPFGRPGITVDTHFQRLVRRWQW
TDETDPDKIEAAVGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEGE
TDPEKAKKLLKYEKGGFPGQRLKPPQAYLDAGGTPAPPLGAA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccaacggccagaaaccccgctagcgctcaagcgtcgggccttcaagatcaac
cgcatccttggggagacctacccctacgcgcattgtgagctggacttccggaacgcctgg
gaacttctcgttgcaacagtgctctccgctcagaccacggatctccgcgtgaaccagacg
acgccccgcctgttcgcgaagtacccgaagcccgcagatctcgcgggagcggaccccatg
gacgttgaagagctgatcaagcccacgggcttcttccgggcgaagacccggagcatcacg
aagatggctgccgccatcgtgcatgaccatgacggacgggtgcccgggacgcttgaggag
atggtcaagctacctggggtcggcaggaagaccgccttcgttgtccttggcaatgcgtgc
gcgtgtgaggcaagcgttaccgcagatcaggcccatggcactaaagtgtgtaccccgttc
ggccggcccgggatcaccgtggacacccacttccagcggctggtccggcgctggcagtgg
accgacgagaccgaccccgacaagatcgaggccgccgtcggcgcgctcttcccgaagagc
gactggaccgacctgtcccaccacgtgatctggcacggccgccgcatctgccacgcccgc
aagcccgcctgcggcgcctgccccatcgccccgctctgcccggcctacggcgagggcgag
accgacccggagaaggcgaagaagctcctgaagtacgagaagggcggcttcccgggccag
cggctcaagcccccgcaggcgtacctcgacgccggcggcacaccggcgccgccactgggg
gccgcgtga
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