Sinocyclocheilus rhinocerous: 107705640
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Entry
107705640 CDS
T04916
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04530
Tight junction
srx04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107705640
09142 Cell motility
04810 Regulation of actin cytoskeleton
107705640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
107705640
NCBI-ProteinID:
XP_016364516
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MGNTESHSSGHGYYGDGRRHLSRKHMSRSLRLSSKQTYCSRRTPSGKPEHRNSETSTRSS
STPSIPQSLADHGLEPFNDSDMLPDFSSPIWVDRVAMNLRPMSFHSHPAHSPAATHTAKQ
AMQDDAEPPEDKSHVQRTQDGSQEASSFKKKRSKSADMWREGSLEVSLSDLSQEHLTSTE
EIGDTPDTCEASLQSSVQELLDSNRANSLDELYGPKSPACRPTHGRYAKWHKGGATSREG
DEDKIISPCEDDGAAYGAYTLPCRRSHCLSEGPTNHQGVMQGRRAQTIQDVTAGDGSDYE
DSGIDGLTGDREASQHHARRYKTMSASFSAYSTSAGGAFAGSDSGSSSGAGAGPSDDTQG
VYENFRQELEQSVSPAEVPEERSSAFSDEQSSVTLSSAYHTDPLLNVAAVQGTVRKAGRL
AVKNFLVHKKNKKVELAPRRKWKSYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWAENS
IVQAVPEHPKKDFVFCLSNSLGDSFLFQTCSQTELENWITAIHSACAAAVARQHHREDTV
RLLRAEIRKLEQKIDMDEKMKKMGDMQLSAVTDAKKRKTILEQIFLWEQNLEQFHMDLFR
FRCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHALVAARTESGVRRRTQA
MSRSTSKRKSRFSSLWGLDTHSKRKSKGHPSISQVFAEGDDQVKSPLEGMFEGSSCETTK
DTKTPVKGLPRPSADHDIWSRDHLTPSWVLLPNDQPVLAIIQPGESALDMLETICKAHQL
DPTKHYVRLKFLIENQVQFYIPKPEEDIYDLLYKEIELCCKIRKVIQFDRDESCMIGYGF
SISVVEEDGVQQLYITDVRAGGLAFAKGLNAGDEILQLNRKDACTLTFADMKVAFAQVSL
SLTVNTLPPVDRRQLCFLPPRRSDAVDNVYTDIFSQSQEEILDDGVGLIVETFGDSLDDD
LELFTEFDDYGKSTEQVAAFCRSLHEMNPSSEVVSSSSGPESSSLPPSNATPRQLSDADK
LRKVICELVETERTYVKDLNCLIGRYLTPLQKESFLTQDELDVLFGNLPEMLEFQVEFLK
TLEDGTRLVPDLEKLERVEEFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKAK
TDVAFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLNVA
MKAMNTVASHINEMQKIHEEFGAVFDLLISEQTGDKKEVADLSMGDLLLHTSVTWINPSS
SLGKCKKEPQLATFVFKTAVVFICKDYSKQKKKMGGSHRASVSGEEKDPFRFRHMIPTDA
LQVRTLSNTDGESAAVCEIIHVKSESEGRPERVFQLCCSSPESKKDFLKTVHSILRDKQR
RQLLKTESLPLSQQYVPFGGKRLCALKGARPAMNRAVSAPTRTLGRRKLVRNRFTIDTDI
VFDTEPDSDSPDSQHAQQQGVVPAGDTDRWVEEQFDLQCYEEQEQDVKETDILSDDDEFC
QSALSPSTEPDVEGPLSALSLEGDTAEEEEEEEEESKKDYKSQHAKLSHLGKQCAMSVAS
VDEQVPDEDIWVRRDSSTENETQDETQS
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacagaaagtcatagcagcggccatggttactatggagacggccggcgccac
ctctcccgtaaacacatgtcccgctcgctccgcctgtccagcaagcagacgtactgttcc
cgccgtacgccgtctggaaaaccggagcatcgcaactccgagaccagcacgcgctccagc
agcactcccagcatcccgcagtcgctggccgaccacggcctggagcccttcaacgactcg
gacatgctgcccgacttcagcagccccatatgggtggaccgcgtggccatgaatctcaga
cccatgtccttccacagccatccggcccattcgcccgccgcgacccacaccgccaaacag
gccatgcaggacgacgccgaaccgccagaggacaagtcccacgtccagcgcacacaggac
ggctcccaagaggcatctagctttaaaaagaaacgctctaagtctgcggatatgtggagg
gagggctcgctggaggtgtccttatccgacctgagccaggagcacctgaccagcacggag
gagatcggagacacgccggacacctgcgaagccagtttgcagtcgtccgttcaggagctg
ctggactcaaaccgtgccaattctttagacgagctctacggaccgaagagccccgcctgc
aggcccacgcacggacgctatgccaaatggcacaagggcggtgccacaagcagagaaggt
gatgaggataaaataatctcgccctgtgaggacgacggagccgcctatggcgcgtataca
ctgccctgccgccggtctcactgtctgtcagagggaccaaccaatcatcaaggagttatg
caagggaggcgggcacaaaccatacaggatgtcacggcgggagatggcagtgattatgag
gacagtggtatcgatgggctgacgggggacagagaggcgtctcagcaccacgctcgacgc
tataagaccatgtctgcgtctttctctgcttactccacgtcagcagggggcgccttcgcc
gggagcgacagtgggagcagcagcggggctggagcgggaccctcagatgacacacagggc
gtctatgagaacttccgtcaggagctggagcagagcgtgagtccggcggaggttcccgag
gagagaagctcagcgttcagcgacgagcagagcagcgtgacgctgagctccgcttaccac
accgaccctctgctgaacgtggccgccgtgcagggaaccgtgcgcaaagccggacgcctc
gccgtcaaaaacttcctggtgcataaaaagaacaagaaggtggagctcgcgcctcgccgc
aagtggaagagctactgggtgtccctcaaaggatgcactctgtttttctacgagacggat
ggccggtcaggcattgatcacaacagcgtccctaaacatgccgtgtgggccgagaacagc
atcgtccaggccgtcccagaacaccccaaaaaagatttcgtcttctgcctgagtaactcg
ctcggagactccttcctttttcagacctgcagccagactgagcttgagaactggatcacg
gccatccactcggcctgcgccgcggccgtcgctcggcaacaccaccgcgaagacacggtg
cgtctgctgcgggccgagatccgaaagctggagcagaagatcgacatggatgagaagatg
aagaaaatgggagacatgcagctctccgctgtcaccgacgccaagaagaggaagaccatt
ctggagcagattttcctgtgggagcagaatttagagcagttccacatggatctattccgt
ttccgctgttacctgtccagcctgcagggcggcgagcttcccaaccccaaacgcctgctg
gccttcgcctcccgtcccaccaaactggccatgggccgactgggcattttttcagtctct
tccttccatgcactggtggcggctcgcactgagagtggcgtgaggcgtaggacacaggcg
atgtcgcgctccaccagcaaacgcaagagtcgcttctcctcactatggggtctggacacc
cactccaagagaaagagtaaaggtcatcccagcatcagccaggtttttgcagaaggagat
gaccaagttaaaagtcctctagaaggcatgtttgagggttcttcttgtgagacgacgaaa
gacaccaagaccccagtgaaaggtctgccaagacccagcgcagatcatgacatctggtcc
agagaccacctcactccatcatgggtgctgctgccaaacgaccagcctgtgttagccatc
atccaacccggagagtcggccctcgacatgctggaaacgatctgcaaggctcaccaactg
gaccccactaaacactacgtgcggcttaagttcctcattgagaaccaagtgcagttttat
atccccaaaccggaggaggatatttatgatctgctgtataaggaaatcgagctgtgctgt
aagatcaggaaggtcatccagtttgatcgggatgagtcctgcatgatcggctatgggttt
tctatctctgtggtggaagaggacggcgtacagcagctctatatcactgacgtgagagct
ggaggattagcgttcgctaaaggtctgaacgcaggagatgagattctgcagctgaacagg
aaggacgcctgcactctgaccttcgctgacatgaaggtggcgttcgctcaggtctctctc
tctctcaccgttaacacactgccccctgttgaccgccggcagctctgcttcttgccaccg
agacgctcagacgctgtggacaacgtctacacggacatcttctctcagagtcaggaggag
attcttgacgatggagtgggtctgattgtggagactttcggagacagtttagacgacgac
ttggagctcttcactgagtttgacgactatggaaagagtacggagcaggtcgcagctttc
tgccgcagtctgcacgagatgaatccctcgtctgaggtcgtctcttcctcgtccggcccg
gagtcttcctcacttcctccgagcaacgccactccacgccagctctccgatgccgacaaa
cttcgcaaagtcatctgcgaactggtggagacggagcgcacctacgtcaaagatctgaac
tgtttgatcgggcgatatttaaccccgctgcagaaggagtctttcctcactcaggatgag
ctggacgtgctgttcggaaacctcccggagatgctggagtttcaggtggagtttctgaag
actctggaagacggaacccggctggtgccggacctggagaaactggagcgagtggaagag
ttcaagaaaatcctcttttctctgggcggctcgttcctgtattacgccgaccgcttcaag
atctacagcgctttctgtgccagccacaccaaagtgcccaaagtgcttgtcaaagcaaaa
acagacgtggccttcaaggcatttctggacgagcgtaaccccaaacagcagcattcatcc
acgctggagtcgtacctgatcaaacccatccagagagtgctgaagtaccctctgctcctg
agagaactgcactcgctcacagaccccgacagcgaggagcactaccatctgaacgttgca
atgaaagccatgaacacagtggccagtcacatcaacgagatgcagaagatccacgaggag
tttggagccgtctttgacctcctcatctctgaacagactggagacaagaaagaggttgct
gacttgtctatgggagatttactcctccacaccagcgtgacatggatcaacccgtcctcc
tcactgggaaagtgcaagaaagagccacagctggccacattcgtgttcaaaaccgctgta
gtgttcatctgtaaggattactccaagcagaagaagaaaatgggtggttctcatagagca
tctgtctccggtgaagagaaagatccgttccgtttccgccacatgatccccactgatgcg
cttcaggtgcgcacactgtccaatacagatggagagagtgcagctgtgtgtgagatcatc
catgtgaagtctgaatcagagggaagaccagagagagtgtttcagctctgctgcagctct
ccagagagtaagaaagacttcttgaagacggttcactccatcctgagagataaacagcgc
cgtcaactgttgaagacggaaagtcttcctctcagccagcagtacgttcccttcggagga
aaacgcctgtgcgccctgaaaggagcccgaccggccatgaacagagcagtatctgccccg
actcgcactctgggccggaggaaactggtgcggaaccgcttcaccatcgacacagacatt
gttttcgacaccgagcccgacagcgactcaccggactcccagcatgctcagcagcagggc
gtcgttccggcgggtgacaccgaccgctgggtggaggaacagttcgaccttcagtgctac
gaggagcaggagcaggacgtgaaggaaacggacatcctgagcgacgacgacgagttctgc
cagtccgctctgagcccatccaccgagccggacgtggagggaccgctttctgccctctcg
ctggagggagacacggctgaggaggaagaagaggaggaagaggagagcaagaaggactac
aaatcccagcatgccaagctgtctcatttagggaagcagtgtgccatgtcagtcgccagt
gtggatgagcaagtgcccgatgaggacatctgggtgcgacgggacagcagcacagagaac
gagacacaggacgaaacccagagctga
DBGET
integrated database retrieval system
