Sinocyclocheilus rhinocerous: 107710252
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Entry
107710252 CDS
T04916
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3 isoform X1
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03018
RNA degradation
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107710252
09123 Folding, sorting and degradation
03018 RNA degradation
107710252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107710252
03041 Spliceosome [BR:
srx03041
]
107710252
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107710252
mRNA degradation factors
5'-3' decay
Lsm complex
107710252
Spliceosome [BR:
srx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107710252
Complex C
U2 snRNP components
107710252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107710252
NCBI-ProteinID:
XP_016370470
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MADDAEQQQTSNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTVEIDEETYEEIYKVTAAAFHIFLCVCVLLSHTVQCQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgctgagcagcaacaaaccagcaacacagtggaagagcctctggatctg
atccggctgagtctggatgagaggatctatgtgaagatgaggaacgacagagagctgcgc
ggcagactgcacgcctatgaccagcacttaaacatgatcctcggagatgttgaagagaca
gtgacgactgtggaaatcgatgaggagacgtatgaggagatttataaggtaactgctgct
gcattccacatttttctttgtgtttgtgttcttcttagtcatacagttcaatgtcagtga
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integrated database retrieval system
