KEGG   Sinocyclocheilus rhinocerous: 107712479
Entry
107712479         CDS       T04916                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107712479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:srx03000]
    107712479
   04121 Ubiquitin system [BR:srx04121]
    107712479
   03036 Chromosome and associated proteins [BR:srx03036]
    107712479
Enzymes [BR:srx01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107712479
Transcription factors [BR:srx03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107712479
Ubiquitin system [BR:srx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107712479
Chromosome and associated proteins [BR:srx03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107712479
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107712479
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box DUF7885 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 107712479
NCBI-ProteinID: XP_016373229
UniProt: A0A673HFS7
LinkDB
Position
Unknown
AA seq 874 aa
MAMSLSADDEDYDSDTAEQQRLPNRPKPKMAASTATTPAATTSSSTATAVKLPSNRTSSG
ARRRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVC
GEAGKEDTLDDEDEKFNAMLMECSICNEIVHPNCLKSGLLPIQVKDAAGVVNDELPNCWE
CPKCNYAGKTGKACKQKRGPGFKYASNLPGSLLREQKAGRDGREEGDQTSTCASSIKRKS
EREETPRLKTEDLPSRLPPLLSPSGLPRPRSEVPNFLRKKRKLFDDDEEEDEASAKKKPK
KPWRPEEPLIPKLSHMKTEEEEDNSDEEEERQEKQEPPRRSFKKDYSTVRKEEEHEKERR
EERDPPFRSLKDFNNYRKEEDQEEEKEDDDEEEEEDNNGKRGRNSSPALKNISLSLESDA
SRCSSPRAGPSSEGSETQEKAPRARAKRHRRKPPNRQLSAELSKQLNMEIRRTEHSLANE
NQQPLKSEPEDSENEEPKRGLRNGTAGNGGGVERGAGGEGGGEWPHLRAREMNGTSWELR
HFYPPQITPLGLNRSSPTIRPLPARSPPKCVQMERHVIRPPPICPPPDRLPLADGRNHIA
PREAWLTIFSHLSHRELCVCMRVCRTWNRWCCDKRLWTHIDLKRCKSITPLMLSGIIRRQ
PITLDLSWTNISKKQLSWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEG
LKDPQMRDLLSPPTDNRPGQMDTRSKLRNVTDLRLAGLDITDSSLRLIIKNMPVLSRLDL
SYCNHINDQSVNLLTAAGTTTRDSLTDVNLSVCNRVTDQSLSYFKRCGSICRIDLRFCKQ
VSRQACERFIAEMSVIVPFQLQEDKLLQKLHSTP
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggccatgtcgctgagtgccgacgatgaggattacgactcggatacagccgaacagcaa
cggctacccaacagacccaagcccaaaatggctgcatcaacagcaacaactccggcagcg
accacttcttcatccactgcaacagcggtcaagctgccgtccaatcgaacctcctctgga
gctcgccgtagacgcacacgatgtcgaaaatgcgaggcatgtgtgcggacggaatgtgga
gagtgtcacttctgtaaggacatgaagaagtttggaggacctggtcgaatgaaacagtct
tgcattatgagacaatgtatagcgcccgtgttaccacatacagcagtatgtgtagtgtgc
ggtgaagctggtaaagaagacacacttgatgatgaagatgaaaaatttaatgccatgctc
atggagtgctccatctgcaatgagattgtccacccaaactgcctcaagtccggtctcttg
cctatacaggtgaaggatgcagctggggtagtaaatgatgagcttcctaactgctgggaa
tgtccaaaatgcaattacgctgggaagactggaaaagcctgcaagcaaaaacggggccca
ggctttaagtacgcatccaacctgccaggctccctgctgagggagcagaaagcaggacgt
gacggaagagaggaaggggaccagacatccacatgtgcttcatccattaagaggaagagt
gaaagggaggaaactcccagactgaagactgaagatctaccatcccgtcttcccccactc
ttgagccctagtggcctgccaagaccacgatctgaagtgcccaacttcttaaggaagaag
aggaagttatttgacgatgatgaagaggaagacgaggctagtgctaaaaagaagccgaag
aaaccctggaggcctgaagagcctttgattcccaaactctctcacatgaaaacagaagag
gaggaagacaattctgacgaggaggaagagaggcaagagaagcaagaaccgcctcgtcgt
tcatttaagaaagactacagcacagtaagaaaagaggaagagcatgagaaagagaggagg
gaggagagagatccacctttcagatccctaaaggactttaataactaccggaaagaggaa
gaccaagaggaagaaaaggaagatgatgatgaggaagaggaggaggacaataatggcaaa
cgaggcaggaacagcagtcctgcactgaagaacatctccttatcgcttgagagtgatgct
tcacggtgcagctccccaagagcagggccaagcagcgaaggtagtgagactcaagagaag
gcaccacgtgctcgggcaaagcgacaccggcgcaagccccctaaccgccagctcagcgca
gaactcagcaagcagctcaacatggagatccgtcgcacagagcattcactggccaatgag
aaccagcagccactcaagagtgaacccgaggacagtgagaacgaggaaccaaagagaggc
ttgcggaacgggactgcagggaatggtggaggtgttgaaagaggagcaggtggagaggga
ggaggggagtggccacacttacgagcaagggagatgaatgggacatcttgggagctgcgg
cacttttaccctcctcagattaccccgcttggcttgaaccgcagttcacctacaatcaga
ccacttcctgcacgttctcctcccaagtgtgttcagatggagcgccatgtgatccggcca
cctccaatctgccctccacctgataggctaccactagctgatggacgcaatcacatcgct
cccagagaagcatggttgactattttcagtcacctgagccatcgtgaactctgtgtgtgc
atgcgagtgtgccgaacatggaatcgctggtgctgtgacaagagattatggactcatatc
gatttgaagcgttgtaaatccatcaccccactgatgctaagtgggataattcgcagacag
cccatcactttggatctgagctggaccaacatctccaaaaagcaattaagctggcttatt
aaccgattaccaggactaagggtgcttctcctatcaggctgttcatgggtggccgtttca
gctctctgcacatccagctgtcctctgctgcgtactctagacctgcaatgggtggagggg
ctcaaagacccccagatgagggacctactatctcctccgactgacaacaggccaggtcag
atggacacacgcagcaaacttcggaatgttactgacctgcgtctggctggtttggacatc
acagacagctctctgcgtctcatcattaaaaatatgcctgtactctcccgtctggacttg
agttactgcaaccatatcaatgaccagtcagtaaacctgctgactgctgcagggaccacc
actagagactccttaactgatgtcaacctttctgtgtgtaacagggtcactgatcagtcg
ctgagctacttcaaacgctgcggaagcatctgccgcattgacctgcgattttgcaagcag
gtgagccgacaggcatgtgagcgtttcattgctgagatgtcggtcatcgttcccttccaa
ctgcaagaggataaacttctccaaaaacttcacagcaccccctag

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