Sinocyclocheilus rhinocerous: 107714335
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Entry
107714335 CDS
T04916
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107714335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srx03000
]
107714335
Transcription factors [BR:
srx03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
107714335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
107714335
NCBI-ProteinID:
XP_016375640
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
METTSPTTTEKKECKGSGLDGSSFSDLPKKPSSTTASRAPHLFSTFHTPIPIDMRHHEGR
YHYEPYPLHPMHGPHGLAGSPIISDISLIRLSPHAGATGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPPDAVTHEHLKERSLFGLPPPPPGANPSEYYHLIASHRSPYGD
LLMQTGAAAAHLPDYMSPVDMSRFPSPRLTPRLSRKRALSISPVSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRGLNAFGHTPP
LLHPSPSLNTRQTLVAAAALTNNNSADTNTESSQNAGGDPAVSSTVNTMIFKRSKVKTEA
DGPHPISPGCQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEFDTQDQLVHHINNDH
IHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCLKAYSRLENLKT
HLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLR
KHVKTVHGPDAHVTKKQRGDAPPKPHPPKGNGENEAHAKHARGRTDGSGEANSTIRGVED
CQHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGSTTNNDSGVEMAMHSGGSLGDLSALDD
TPVVDSTGSPGTSAGVGLQLRKIRGGLLNLENIKKEKLKTVRDSCSWTNASPQVRNTKLP
PIPSIDSLLETPNMGSQMPGPPTQRLGDLSSYEMTMLNQLQERRDSSTSTMSSAYTLSRR
SSGISPCYSSRRSSEASQFGVRNNNVSSADSYDPISTDLSRRSSEASQCGGAGGLTSLLS
LTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSAHLHHSQSVVNSR
RCSDTGYGAPGMMPHEVPANLPRRASDPVRRTTIDPLSLPRVQRFNSISNMTLSRLPAID
LRTFNLQSNTWSDGSLHRHPFSQRPPSISENVLMENMATDGGDQQEDDLVLPDDMVQYLK
SQNGSSNQDPGISVNGGHALDLHGNMTSQQQQQFYGQRRMGMASNNGSHVESVCSDPEQM
ANPQGMNKNNMPVQWNEVSSGSVDATARLPKQQQLRGNLTVVQQKQNFGSYQGFSTNQQI
VPMSQNLASLQQEYPQRVTQRMNSVLQYRQSVTNPCQNLGEQVNPQSGYRQDLNYNSSQC
LTCSGMGPPNGRAVQNQEVQNYRSNFSHTNNVNQQNYIPLTQTAVQNAGRGLIQPRPPSE
PKPLNRQHSGSGMIQQNGCSLSNVNSSEARPKRPGDFGQHSNGNGTMYYSGEIHMLDSSV
GYGSPMSPCTNQAPVASVSTMASPGVNQVTSTVDSTQTLEHTQIDFDAILDDGDHSSLMS
GTLSPGLLQSLSQNSSRHTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgagtcccaccaccacagaaaagaaggaatgcaaggggtcaggcctggat
ggcagcagtttctcagaccttcccaaaaagccctcatcgaccacagcatcccgagctcct
cacttattctcaaccttccacacgccgattccaatcgacatgcggcaccatgaggggagg
taccattacgagccatatcctctgcaccccatgcatggaccacatggattagctggcagt
ccaattatctctgatatctcgctcatccgactatcgcctcacgctggagctactggagag
tcacccttcaacccacctcacccgtatgtcaacccacacatggagcactacctgcgatca
gtccacagcagccccacactctccatgatctccgcagcacgaggactgagccctcctgac
gcagtgacccacgaacacctgaaggagcggagcttgtttggcctgccccctcccccacca
ggggccaacccttcagagtactatcacctcatcgccagtcaccgcagcccttatggagac
ctgctcatgcagacgggggccgcggctgctcatcttcctgactacatgagcccagtggac
atgtctcgtttccccagtcccagactgacgccgaggttgagcaggaagcgagcgctgtcc
atctctccagtctcggatgccagcatcgacctgcagaccatgatccgcacctcgcccaac
tctctggtggcctacatcaataactcccgctccagctcggctgccagcagctcttacggc
cacctctccgtcggggccatcagtccctccttcacgttcccacatcctatcacaccggtt
gcataccaccagctgctgtcccaacagagaggtctaaatgcgtttggacacactccccct
ctcctacacccttctccttccctcaacaccaggcagacgctggtggcagcagctgctctg
accaacaacaacagcgccgacactaacacagagtccagccagaatgctggtggagacccg
gctgtcagcagcacggtcaacactatgatcttcaagaggtcaaaggtgaagactgaagca
gatggaccccaccccatctcacctggatgtcaggatcacatggagttgcgagaggaactt
gataaagatgaatgcaagcaagagcctgaggccgtgtatgagaccaactgccactgggaa
ggatgttccaaagagttcgacacccaggaccagctagttcatcatatcaataatgaccac
atccatggggagaagaaggagtttgtgtgtcgatgggaggagtgctcacgagaacagaag
cctttcaaggcccagtacatgcttgtggtccacatgcgacgacacactggggagaagccc
cataagtgcacatttgaaggttgtttgaaggcttactctcgactggaaaacctcaaaact
cacttgaggtcccacacaggggagaaaccttatgtatgtgagcatgagggttgtaacaag
gcgttttccaatgcttcagaccgagccaagcaccagaaccgcacgcactcgaatgagaaa
ccatatgtgtgtaagatcccaggttgtacaaaacgctataccgaccctagttctctcagg
aaacatgtgaagaccgttcatggtccagacgcacatgtcactaagaagcagcgtggtgat
gcaccacctaaacctcaccctcctaaagggaatggagaaaatgaggcacacgcaaagcat
gcaaggggaagaacagacgggtcaggggaagccaacagcaccatccgaggagtggaggat
tgccagcatgtcaaatctatcaagacggaaaacacagtgatgtatcagtccagccctggt
ggtcagtcatcatgtagcagtgagccatcgccacttggcagtaccaccaacaatgacagt
ggagtagagatggctatgcacagtggaggcagtttgggggacctgagtgctttagatgac
acgcctgttgtagattctactggttctccaggtacttctgcaggagtgggtctccagctg
cgtaaaatcaggggaggactactaaatcttgagaacatcaagaaggaaaaactaaaaact
gtaagagactcctgctcctggacgaatgcatcacctcaagtccgaaataccaagctgcct
ccaataccttctattgactcactgctggagactccaaatatgggcagtcagatgcctgga
cctccaacccaacgtttaggagacttgtcttcgtatgagatgacaatgctaaatcagctg
caagagcgcagagacagctccaccagcacaatgagctcagcatacacgttaagtcgtcgg
tcctccggtatttcaccctgctactccagtcgtcgctctagcgaagcttcacaatttggt
gtccgcaacaacaacgtcagttcagcagactcctatgaccccatctccacagatctgtca
cgccgttccagcgaagctagccaatgtggtggtgcaggtggactcacaagtttactaagt
ctcacgccggctcaacactaccgtctcaaagcaaaatacgctgcagccacagggggtgca
ccaccaacacctctgcccaacatggatcgcatgagtcttagaactagaatggccctgtac
aatgactcgcaagaaagttcggcacatttgcaccattcccaaagtgtagtcaactcaaga
cgctgcagtgacactggctatggcgcccctggcatgatgcctcatgaagttccggctaat
cttccacgacgagcaagcgatcctgttcgtcgtacaactatcgacccgctctccttgccg
agggttcagcgattcaacagcatcagcaacatgaccctatcacgtctgcctgcgatagat
ctacgtactttcaacttgcagagcaacacctggtctgatggcagcttgcatcgtcatccc
ttcagccagaggccacctagtatttcagagaatgttttaatggagaatatggccactgat
ggaggtgatcagcaagaagatgatttggtgctaccagatgacatggtacagtacctcaag
tcccagaatggtagctcaaatcaagacccagggatttctgtcaacggtggtcatgcacta
gacttacatggtaatatgacctcccaacaacaacagcaattctatgggcagcggcgaatg
ggcatggcaagcaacaacggaagtcatgtagagtctgtttgctcagatccagagcaaatg
gccaatccgcaaggcatgaacaagaacaacatgcctgtacaatggaacgaggtcagttct
ggttctgtggatgcaactgcaaggcttccaaagcagcaacaactccgagggaacttgaca
gtggttcagcagaaacagaactttggttcttaccaaggctttagcactaatcaacagatt
gtaccaatgagccagaatctggctagcctgcaacaggaatatccacagagggtcacccaa
aggatgaattctgtactgcagtatcggcagtctgttaccaatccatgtcagaatctcggc
gagcaagtaaaccctcaatcgggatatcgacaggacctcaattacaactccagtcaatgc
ctaacatgcagtggcatgggtccacccaatggaagagcagtgcaaaaccaggaggtgcag
aattacagatccaacttttcacatacaaataacgtcaaccagcaaaattacatccccctt
actcagacagccgttcaaaatgcaggcagaggactgatacagcccagacctccgtccgag
cccaaacctttaaatagacaacactcaggttcaggtatgattcagcaaaatggttgctcc
ctgtccaacgtcaactcctcagaagctagaccaaagagaccaggtgacttcggtcagcac
agcaatgggaatggcactatgtactattcaggagagatccatatgttggacagtagcgtg
ggttatggttctcccatgtctccatgcacaaaccaagcccctgttgcttcagtgtctaca
atggcatctcctggggttaaccaggtcaccagcacggtggactccactcaaaccctcgag
cacactcaaatagattttgatgccattttggatgatggagaccattcgagcctaatgtct
ggcacattaagtccaggccttctgcagagtctttcgcagaattcctcacgacacaccacc
ccgcgtaactccgttactctagcctcaataccggcaggtattggcaacatggccattggt
gacatgagctcaatgttaacagcccttgcagaggaaagcaaattcttaaacatgatggct
taa
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