Sinocyclocheilus rhinocerous: 107714854
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Entry
107714854 CDS
T04916
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
srx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107714854
Enzymes [BR:
srx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
107714854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4962
Sulfotransfer_3
Sulfotransfer_1
Motif
Other DBs
NCBI-GeneID:
107714854
NCBI-ProteinID:
XP_016376323
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MVMENLQRSAVLLCVLAVGLTFCGISSASDRYVPLNEHQTDNTTLSAHPKLYFDLTELRL
MKQRATTTHRHIFKVIRNAVSVMLSSAAVYQPPVRHEDFGKKWNEIYGNNLPPLALYCLL
QPEDATASQFLIEYMDRMVAYPDWTVSSAPNDEVPIAHSLTGFATAYDIIYTFLDTRRRL
RYLKKIRSVTEELFELSKHRGWGKQFLQNHQTTNILAILIGALVAGEHNDPETMIWKQIS
VNYMEKTMFLLSHIVDGSLDEGVAYGSYTAKSITQYVYLALRHFQIDNTQNNWLRAHFMF
YFATLLPGFQRTVGIADSNYNWFYGPESQLVFLDAYVLRNGSGNWLAEQIRKHRPKDGHM
MQSAAQRWATLHTEYIWYDSDLTPQPPPDFNKATMHVFSNWGVVTYGAGLPQTQGNTFVS
FKSGKLGGRAVYDIVHAQPYSWVEGWTNFNPGHEHPDQNSFTFAPNGQVFVSEALYGPKY
SYLNNVLVFAPSPTSQCNQPWEGQLGECSKWLRWGEKEVGDTAGEVIAASSHQDMLFVSG
ESVSAYSSSMKLKSVYRALVLLNSQTLLVLDHIEKHERSPLSSLSAFFHNLDIDFRYVPH
RSFGKYSGALMDVWDAHYKMFWLDAQGSSPVARIQEAEQAAEFKKRWTQYINVTFPMENP
VTRVAYLMHGPYTKVSDCRFIDNSKNGVKISVTLNDTETVVSVVTNYEDIEARHGYLGFA
GFAKTEDNRRIVQFGRGIQTLPSQVTNDFVFDFGLVVNISVVLTLCLALGFVMKKRKFHV
SFNMLIHCTLVCVLLLWVTELLSLFNGCEQLLCNVKSKDSSIFDGTDSSVHDLLPIITIT
SMPGSGAEILQHLFDNSSDFVFLQIPSAYLRFPVSPFVSLVDACEWSKADAQNGRFRVIQ
GWFHSIVHNVKLHLQNIQLHQSNDDIESKVKEKGQRKRRMLLSEQTRTGDGKGTHTDIGY
IQELRQHLVKYPNARPVLNMASGGWFLKLPYLQEVIGRSLRSVHVVRDPRAWIYLMLYSS
KPSLYLRKNIKRHIVNIFKQNSDGVDQGCAIVDSQFLPLKKILSQPDPNPVQLLAQLWLA
HNSAGLKVSASLPQHTYLIVKFEDVVYFPEETARKIHNFLGIPVAPAALNQLTFTTSTNL
YNLIYEGDISPAKINMWKENMAVDEIKLIEDTCWPVMERLGYKRHTGRHSFL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggagaacttgcagaggtctgcggttttgctctgtgtcttggctgtgggactt
actttctgtggaatttcgtctgcctcagacagatacgtgcctttgaatgaacaccaaaca
gacaataccaccttgtcagcacaccccaagctatactttgatctgacagaattgcgtttg
atgaaacaaagggccaccaccacgcatagacacatatttaaagttattcgaaatgctgtt
tctgttatgttatccagtgcagctgtttaccagcctccggtgaggcatgaggatttcggc
aagaaatggaatgagatctatggtaacaatttgccccctcttgcactatactgtctgctt
caacctgaggatgctaccgcctctcaatttttgattgagtacatggaccgaatggtggca
tatccagattggacagtgtccagtgcgccaaatgacgaggtcccaatcgcccactctctc
actgggtttgccacagcatatgatataatttacacctttcttgacacccggagaagattg
cgttatctcaagaaaatacgatctgttaccgaggagcttttcgagctttccaagcacaga
ggatggggaaagcagtttctacagaaccaccagacaactaatatactagccattctcatt
ggtgctcttgtggcgggggaacataatgacccagagacgatgatatggaagcagatatca
gtgaactacatggaaaagaccatgtttcttctcagccacattgtcgatggctctctcgat
gagggtgttgcgtacggtagctacacagcaaaatccatcactcagtatgtttacttagca
ttgcgtcattttcagatagacaacacacagaacaactggctcagagctcacttcatgttt
tactttgctacactgcttcctggatttcaaagaacagttggcattgcagactccaattac
aactggttctatgggccagagagccagcttgtgtttctggatgcatatgtgctccgaaat
ggctcaggaaactggctggcagagcagattaggaagcatcgtcctaaagacggacacatg
atgcaatcagcagcccaacgctgggctactttacatacagagtacatatggtatgactct
gacttaactccacagcctccacctgactttaacaaagcaaccatgcacgttttctccaac
tggggtgtggtgacgtatggagcagggttaccacaaactcagggtaatacttttgtgtca
tttaaatctggaaaattaggagggcgagcggtgtatgatattgtccatgcacaaccgtac
tcttgggtagaaggctggacgaactttaaccccgggcacgagcaccctgatcaaaactcc
tttacttttgcaccaaatggacaggtgtttgtctctgaggccttgtatggtcctaaatac
agctatcttaacaatgtgctggtatttgccccctcacccaccagccagtgtaatcagcca
tgggaaggacagttgggggaatgttcaaagtggttacgatggggagaaaaggaagtcggg
gataccgctggggaggtcattgcagcttcatcgcatcaggacatgttgtttgtgagtgga
gagtctgtgtcagcctattcatcttccatgaagctaaagagtgtgtatcgggcacttgtg
cttctcaactctcaaacattacttgtgctggaccacattgagaaacacgagcgctcccct
ctcagttctctcagtgcgttttttcataaccttgacattgatttcaggtacgttcctcac
agatcatttggaaaatacagtggggctctgatggatgtgtgggacgcacattacaaaatg
ttctggctggacgctcaaggatccagccctgttgccaggatacaagaggcagaacaggct
gccgaattcaaaaagagatggacgcagtacataaacgtgacctttcccatggagaaccct
gtcactagagtggcttatttgatgcatggcccatacaccaaggtctcggactgtagattc
atagacaacagtaaaaatggagtaaaaatatcagtgactcttaatgacacagagactgtt
gtgtcagttgtaacaaactacgaagacattgaggctagacatggctacttgggctttgca
ggctttgctaaaacagaagacaacagaagaatagttcagtttggccggggaattcaaacc
ttgcctagtcaagtcaccaatgattttgtgtttgactttggattggtggttaacatctct
gtggtattgactttatgtcttgctttaggtttcgtaatgaaaaaaaggaagtttcatgtg
tcgttcaatatgctaattcattgcactctggtctgtgtgctgttgttgtgggtgactgaa
cttttgtctctttttaatggctgtgaacagctcttgtgcaatgttaaatcaaaagacagc
agcatatttgatggaacagactctagtgtccatgacctcctccccatcatcaccatcaca
tccatgccaggctcgggcgcggagatcctccagcacctttttgataatagctctgacttt
gtattcctccagatcccttcggcctacctgcggttccctgtatctcctttcgtatctctg
gtggacgcttgtgagtggtctaaagcagatgcgcaaaatggacgatttcgggtcattcag
ggatggttccattccatagtccacaatgtgaaactgcacctgcaaaatattcaattgcac
cagagcaatgatgacatagaaagtaaagtcaaagaaaaaggacaaagaaagagaagaatg
ctgctatcagagcaaacaaggacaggggacggcaagggtacccatacggacatcggatac
atacaagagctcaggcagcacctggtgaagtacccaaatgcccggccggtgctgaacatg
gccagtggaggctggttcttgaagctgccgtatcttcaagaggtcataggtcgctcactt
cgctcagttcatgttgtcagagacccacgtgcatggatttatctaatgctctacagcagc
aagccaagcctgtacttacgtaagaatattaaaaggcacattgtcaacatttttaagcag
aacagtgatggtgtggatcagggctgtgctatagtggactcacagttccttcctttaaag
aagatcctttcccagccagatcccaaccctgtccagcttctagctcagctatggctggct
cacaattcagcaggactcaaggtgagcgcaagcctcccccaacacacttaccttatagtc
aaatttgaagatgttgtatattttcctgaagagacagcgagaaagatacataactttctt
ggaataccagttgcaccagctgcgttaaaccagctgacatttaccacatctacaaatctg
tataatctgatatatgaaggagatatatcacctgccaaaatcaacatgtggaaggagaat
atggctgtagatgagattaaactcattgaagacacatgctggcctgtgatggagaggctg
ggttataaaagacatacaggcaggcattcatttttgtaa
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