Sinocyclocheilus rhinocerous: 107715162
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Entry
107715162 CDS
T04916
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107715162
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107715162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
Ank_4
Ank_5
Ank_3
YVC1_C
Motif
Other DBs
NCBI-GeneID:
107715162
NCBI-ProteinID:
XP_016376709
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSMKGRGSKYQKRVSFSEDEDDQCWKEENGGVDAHHLKSVKTVRDPSGYYRYNMKSSDSF
PHRRMTLPREKGRRQAIRGPAFMFNARGSSLTPEEERFLEAAEYGNIPVVRKMLEESPTL
NVNCVDYMGQNGLQLAVGNEHLEVTELLLRRDNLARVGDALLLAISKGYVRIVEALLGHP
SFAGGERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIE
RPHDYFCKCADCTEKQRKDSFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELTK
LANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVVAILNGDISAELEEGQHHRCLLSR
VKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAVKCLVVLVVALGLPLLAVGYW
FAPCSKLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGITTLPNVTVTDHPLQIFR
VKTTQFSWTEILIMVWVAGMMWSECKELWTEGPREYIMQLWNVLDFGMLSIFIAAFTARF
FAFLQAMKAQEYVDENIHAPDLSLVTLPPDIKYFTYARDKWLPSDPQLISEGLYAIAVVL
SFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAKLN
LFTQSSMRMPNSHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQD
ISSLRYELLEEKSQATEELSLLIQKLSDKLNPRPVHLH
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaggcagaggatccaaataccagaaaagagtgtcgttttctgaggatgaa
gatgaccagtgctggaaagaggagaacggcggtgtggacgcacatcacctgaaatccgtc
aagacggtcagggatccatcgggatattaccggtacaacatgaaatcttcggatagtttc
ccccatcgcaggatgaccctaccgcgagaaaagggccgacgacaggcgattcgcggaccg
gcgttcatgttcaacgcccgtggcagcagcctcacgccggaggaagagcgctttctggaa
gcggcggagtacggtaacatcccggtggtccggaagatgctggaagaatcacccacgctc
aacgtgaactgtgtcgactacatgggacagaacgggctacagctggccgtcggcaacgaa
cacctggaggtcaccgagctgctcctgcggcgagacaacctggcccgtgtcggggatgcg
ctcctgctggcgatttctaaaggttacgtgcgtatcgtggaggccctgctgggacatccg
tcctttgcgggcggcgaacgactcacccgcagcccctgcgagctgcaagacgatgacttc
tactcctacgacgaggacggcacacggttctcgcccgatatcactcctatcatcctggct
gcccactgccagaaatacgaggtcgtgcacatgctgctgatgaagggcgccaggatcgag
cggccgcatgactacttctgcaaatgcgccgactgcacggaaaagcagaggaaggactcg
ttcagtcactcgcgctccaggataaatgcgtaccgcggactggccagtccggcgtatctc
tctctgtccagcgaagacccggtactgactgcgctggaactgagcaatgagctcaccaaa
ctcgccaacatcgagaaagagtttaagaatgactacaggaagctgtctatgcagtgtaaa
gactttgtggttggcgttttggatctgtgcagggacacggaggaggtggtggccatcttg
aatggagatatatctgctgaactcgaggaaggccagcatcatcgctgcctgctcagtcga
gtcaaactggccattaaatacgaggttaagaagtttgtggctcatccgaactgtcagcag
cagttgctgacgatctggtatgagaatctgtctggtcttcgggagcaaaccattgcagtg
aagtgtctggtggttttggtggtggcgctgggactccctctgctagctgtggggtattgg
tttgccccatgcagtaaacttggtaaaatactacgcagtccttttatgaagtttgttgct
catgcggcctcctttatcatcttcctgtgtctgctggtgttcaatgcatccgatcggttt
gaaggcatcaccacccttcccaacgtcaccgtcactgaccacccgctccagatcttcaga
gtcaagaccacacaattctcctggacagaaatactgatcatggtctgggtagcaggaatg
atgtggtcggagtgtaaggagctctggacggagggtccgagggaatatatcatgcagctg
tggaatgttctggatttcggcatgctctccatcttcatcgctgcattcaccgcccgcttt
ttcgccttcctacaggcaatgaaagcccaggagtatgtggatgagaacatccacgctcca
gacctctcactggtcacgctgccgccggacatcaaatatttcacatacgcgagagacaag
tggcttccatcggatcctcaactgatctctgagggtctgtacgccatcgctgtggtcctg
agcttctctcgtatcgcctacatcctcccggccaatgagagcttcgggccgctgcagatc
tctctgggacgaaccgtgaaggacatcttcaagttcatggtcctcttcatcatggtcttc
ctcgcattcatgattggcatgttcatcctttactcttactacctgggggcaaagctgaac
ctcttcacccagtctagcatgaggatgccgaactctcacagcttcaacagcatcctaaat
caacccacacgctatcagcaaattatgaagcgtctcatcaaacgctatgtactgaaagca
caagtggacaaagaaaatgatgaagtgaacgaaggcgagctgaaggagatcaagcaggat
atttccagtctgcgatatgagctgctggaggagaaatctcaggccacagaagaactctca
ctcctcatacagaaactcagtgacaaactcaacccgcgacctgtccatctacactga
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