Sinocyclocheilus rhinocerous: 107719693 Help Entry 107719693         CDS       T04916                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04115   p53 signaling pathway srx04145   Phagosome srx04148   Efferocytosis srx04350   TGF-beta signaling pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04518   Integrin signaling srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107719693   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107719693    04518 Integrin signaling     107719693  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107719693    04148 Efferocytosis     107719693   09143 Cell growth and death    04115 p53 signaling pathway     107719693   09144 Cellular community - eukaryotes    04510 Focal adhesion     107719693   09142 Cell motility    04820 Cytoskeleton in muscle cells     107719693  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107719693   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107719693 Membrane trafficking [BR:srx04131]  Endocytosis   Phagocytosis    Opsonins     107719693 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107719693 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  107719693 NCBI-ProteinID:  XP_016382665 LinkDB All DBs Position Unknown AA seq 1211 aa AA seqDB search MCSEEQNISNKHTHTVKDTRGSRQSVFTIRVSLFRGIMTLRGLVLCLFLWSCVSSRRVEM PDDDTVFDLFELTHVHKKHHGVSLVKGPDPNSPAYKILNPNLIPSVPELSFRDLIYSIQS ERGFIFTANLKQAKRTRGSLVSVERTDGTGSVFEIISNGKANTVDLVYWTASGQHVVSIE DVDVANGHWKNITVFVQEDRAQVHVGCEEINTQELDAPIQQILNQESADISSLRIAKGAA KSDRFMGVLQNVRFVFGTTLDAILRNKGCESSTFITDVMTLENPVNGSSPAIRTDYTGHK SKDLQDICGFSCDDLSSMFKELKGLGMVVKQLSNELRQVTADNNLIMTQIKIHEGVCLHN GIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPCANATVPDGECCPRCGTPNDAGVD GWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTSVQTRDCYTQECDKRFKQDGGWSH WSPWSSCSVTCGEGIITRIRLCNSPTPQMGGKDCEGDGRQTEPCQKDPCPVNGGWGPWSP WDSCSVTCGGGLQRRHHLCNSPAPKYGGKECMGDSKGTRLCNAQSCPVDGCLSNPCFAGT KCTSFPDGSWKCGECPVGYTGDGVHCQDIDECKEVPDACFVLNGVHQCVNTEPGYNCLPC PPRYSGQQPFGRGTDQAIANKQVCTPRNPCEDGSHDCNKNANCIYLGIFSDIMYRCECKP GYAGNGYICGGDSDLDGWPNTDLHCVENATYHCKKDNCPDLPNSGQEDYDKDGTGDACDN DDDNDGIPDDGDNCPFIFNPRQYDHDRDQVGDTCDNCPYDSNPEQTDTDNNGEGDACAID IDGDGILNEKDNCPYVYNTDQRDSDGDGVGDHCDNCPLEHNPDQIDSDSDNIGDKCDNNQ DIDEDGHQNNLDNCPYISNANQVDHDKDGKGDACDHDDDNDGVPDDKDNCRLAFNPDQLD SDGDGRGDVCKDDFDVDNVPDIYDVCPENFGISETDFRRFQMVPLDPTGTSQIDPNWVVR HQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRDDDYAGFVFGYQSSSRFYVVMW KQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGDTEGQVRTLWHDPKNI GWKDYTAYRWHLIHRPKTGHIRVIMYEGKKVLADSGSINDKTYAGGRLGLFVFSQEMVYF SDLKYECRDAS NT seq 3636 nt NT seq  +upstreamnt  +downstreamnt atgtgctcagaagagcagaacatctccaacaaacacacacacacagtcaaagatacaagg ggatctcggcaaagcgtcttcactataagagtgtctctcttcaggggaatcatgactctg agaggactcgttttgtgcctcttcttgtggagttgcgtgagcagcagacgcgtagaaatg ccggatgatgacaccgtgttcgacctgttcgagctcactcatgtccacaagaagcatcac ggggtgagtttagtgaagggacccgatccaaacagccccgcgtacaagatcctgaacccg aacctgatcccctcagtgcccgagctctccttcagggacctgatctactccatccagagc gagagaggcttcatcttcaccgccaacctcaagcaagccaagcgcaccaggggcagcctg gtctccgtggagaggacagacggcaccggatccgtctttgagatcatctccaacgggaaa gccaacaccgtggatctggtgtactggaccgcgagcgggcagcatgtggtgtccattgag gacgtggacgtggcgaacggacactggaagaacatcacggtgtttgtgcaggaggatcga gctcaggttcatgtgggctgcgaggagatcaacactcaagaactcgatgctccgatccag cagatcctgaatcaggagagcgcggacatctcgagcctgaggatcgccaaaggagctgcc aaatccgatcgctttatgggagttctccagaacgtgcggtttgtctttggaacgacgctg gatgcgattttacgcaacaaaggatgcgagagctcaaccttcatcactgatgtcatgacc ttggaaaaccccgtgaacggatccagcccggccatccgcactgattacaccggacacaag tctaaagatctgcaggacatctgcggtttctcctgcgacgatctgtcgagcatgtttaag gagctcaagggactcggcatggtggtgaagcagttgtcaaacgagctccgccaagtgaca gcagacaacaacttaatcatgactcagattaaaatccacgaaggggtttgtctgcacaat ggcatcgtttacagagacaaagacgagtggacggtggacagctgcacccactgcacatgt cagaactccgccactgtgtgccgtgaaatctcttgtcctctcatgccctgtgccaacgcc accgtccctgacggcgaatgctgcccacgctgtggaacaccgaacgatgcgggtgtggac ggctggtcgccctggtcagaatggacacactgttcggtgacctgcggcagaggcattcag cagcgcggacgctcctgtgaccgaatcaacagcaactgcgacggcacgtctgtccagacg agagattgttacacgcaagaatgcgacaaacgcttcaagcaggacggcggctggagccat tggtccccctggtcttcttgctcagtgacgtgtggcgagggcatcatcactcgcatccgg ttgtgcaactcccctacgcctcagatgggcgggaaagactgtgagggagatggtcgtcag accgaaccgtgccagaaggatccgtgcccagtgaatggaggttggggaccctggtcacca tgggactcttgctccgtcacgtgcggtggaggactgcagcgcagacaccatctgtgtaac agccccgctcccaaatacggtggaaaagaatgtatgggtgactccaaaggcacccgtttg tgcaacgcccagtcgtgtccagttgatggatgcctgtctaacccgtgcttcgccggcacc aaatgcaccagcttccccgatggctcctggaagtgcggcgagtgtccggttggatacact ggggatggagtccactgtcaagacatcgacgagtgcaaagaagttcctgatgcctgtttc gtgctcaatggagtccaccagtgtgtgaacacagaaccaggctacaactgcctgccctgc cctccacgctactctggacagcagcccttcggcaggggaacggaccaggccattgccaac aaacaggtctgcacacctagaaacccatgtgaagacggcagccatgactgcaataagaat gccaactgcatctacctaggcatcttctctgacatcatgtaccgctgcgaatgtaaacca ggctatgctgggaacggttacatctgtggaggggactctgaccttgacggctggccaaac acggacctccactgtgtggaaaacgccacctaccactgcaagaaggacaactgtcctgac cttcccaactctggtcaagaagactatgacaaagatggaactggagatgcttgtgataat gatgatgacaacgatgggatccctgatgacggggacaattgcccgttcatctttaaccca agacagtacgaccatgaccgcgatcaagttggtgacacatgcgataattgtccatatgac agtaatccagaacagaccgacaccgacaacaacggcgagggtgatgcgtgtgccattgac atcgatggtgatggcatcctgaatgagaaggacaactgtccatatgtgtacaacactgac cagagagacagtgacggagacggagtcggtgaccactgtgacaactgcccactggagcac aaccctgaccagatcgactctgactctgacaacattggagacaagtgtgacaacaaccag gacatagatgaggatggacatcagaacaacctggacaactgtccctacatctccaacgcc aaccaggtcgaccacgacaaggatggcaaaggagacgcctgcgatcacgacgacgacaat gatggtgtgcctgacgacaaagataactgccgactcgccttcaacccagatcaactggat tcggacggagacgggcgaggcgacgtttgtaaggacgactttgacgtcgataacgtgccg gatatttacgacgtttgcccggagaactttggcatcagtgaaacagatttccgtaggttc caaatggttcctctcgatccgacgggaacttcccaaatcgaccccaactgggtcgtccgt caccagggcaaagaacttctgcagaccgtcaactgtgatcctggcattgctgttggttat gatgagttcaatgccgtggactttagcggcacgttcttcatcaacacagaccgtgacgac gactacgccggctttgtgtttggctaccaatccagctcacgtttctacgtggtgatgtgg aaacagatcacacagacctactggtctcatacacccactaaagcacaggggtactctgga ctgtccattaaagtagtgaactcgaccacaggaccgggcgaacatctcaggaacgctttg tggcacactggagacaccgagggacaggtgcgtaccttgtggcatgatcccaagaacatt ggctggaaggattacaccgcctacagatggcacctgatccatagacccaaaactggacac atcagagtcattatgtatgaaggcaagaaagtcttggctgattcaggaagcatcaatgac aagacatatgccggaggaagacttggcctctttgtcttctctcaagagatggtttacttc tcagacctcaaatacgaatgccgagatgcatcttaa

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