Sinocyclocheilus rhinocerous: 107719693 Help Entry 107719693         CDS       T04916                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04115   p53 signaling pathway srx04145   Phagosome srx04148   Efferocytosis srx04350   TGF-beta signaling pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107719693   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107719693  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107719693    04148 Efferocytosis     107719693   09143 Cell growth and death    04115 p53 signaling pathway     107719693   09144 Cellular community - eukaryotes    04510 Focal adhesion     107719693   09142 Cell motility    04820 Cytoskeleton in muscle cells     107719693  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107719693   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107719693 Membrane trafficking [BR:srx04131]  Endocytosis   Phagocytosis    Opsonins     107719693 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107719693 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  107719693 NCBI-ProteinID:  XP_016382665 LinkDB All DBs Position Unknown AA seq 1211 aa AA seqDB search MCSEEQNISNKHTHTVKDTRGSRQSVFTIRVSLFRGIMTLRGLVLCLFLWSCVSSRRVEM PDDDTVFDLFELTHVHKKHHGVSLVKGPDPNSPAYKILNPNLIPSVPELSFRDLIYSIQS ERGFIFTANLKQAKRTRGSLVSVERTDGTGSVFEIISNGKANTVDLVYWTASGQHVVSIE DVDVANGHWKNITVFVQEDRAQVHVGCEEINTQELDAPIQQILNQESADISSLRIAKGAA KSDRFMGVLQNVRFVFGTTLDAILRNKGCESSTFITDVMTLENPVNGSSPAIRTDYTGHK SKDLQDICGFSCDDLSSMFKELKGLGMVVKQLSNELRQVTADNNLIMTQIKIHEGVCLHN GIVYRDKDEWTVDSCTHCTCQNSATVCREISCPLMPCANATVPDGECCPRCGTPNDAGVD GWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTSVQTRDCYTQECDKRFKQDGGWSH WSPWSSCSVTCGEGIITRIRLCNSPTPQMGGKDCEGDGRQTEPCQKDPCPVNGGWGPWSP WDSCSVTCGGGLQRRHHLCNSPAPKYGGKECMGDSKGTRLCNAQSCPVDGCLSNPCFAGT KCTSFPDGSWKCGECPVGYTGDGVHCQDIDECKEVPDACFVLNGVHQCVNTEPGYNCLPC PPRYSGQQPFGRGTDQAIANKQVCTPRNPCEDGSHDCNKNANCIYLGIFSDIMYRCECKP GYAGNGYICGGDSDLDGWPNTDLHCVENATYHCKKDNCPDLPNSGQEDYDKDGTGDACDN DDDNDGIPDDGDNCPFIFNPRQYDHDRDQVGDTCDNCPYDSNPEQTDTDNNGEGDACAID IDGDGILNEKDNCPYVYNTDQRDSDGDGVGDHCDNCPLEHNPDQIDSDSDNIGDKCDNNQ DIDEDGHQNNLDNCPYISNANQVDHDKDGKGDACDHDDDNDGVPDDKDNCRLAFNPDQLD SDGDGRGDVCKDDFDVDNVPDIYDVCPENFGISETDFRRFQMVPLDPTGTSQIDPNWVVR HQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTDRDDDYAGFVFGYQSSSRFYVVMW KQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGDTEGQVRTLWHDPKNI GWKDYTAYRWHLIHRPKTGHIRVIMYEGKKVLADSGSINDKTYAGGRLGLFVFSQEMVYF SDLKYECRDAS NT seq 3636 nt NT seq  +upstreamnt  +downstreamnt atgtgctcagaagagcagaacatctccaacaaacacacacacacagtcaaagatacaagg ggatctcggcaaagcgtcttcactataagagtgtctctcttcaggggaatcatgactctg agaggactcgttttgtgcctcttcttgtggagttgcgtgagcagcagacgcgtagaaatg ccggatgatgacaccgtgttcgacctgttcgagctcactcatgtccacaagaagcatcac ggggtgagtttagtgaagggacccgatccaaacagccccgcgtacaagatcctgaacccg aacctgatcccctcagtgcccgagctctccttcagggacctgatctactccatccagagc gagagaggcttcatcttcaccgccaacctcaagcaagccaagcgcaccaggggcagcctg gtctccgtggagaggacagacggcaccggatccgtctttgagatcatctccaacgggaaa gccaacaccgtggatctggtgtactggaccgcgagcgggcagcatgtggtgtccattgag gacgtggacgtggcgaacggacactggaagaacatcacggtgtttgtgcaggaggatcga gctcaggttcatgtgggctgcgaggagatcaacactcaagaactcgatgctccgatccag cagatcctgaatcaggagagcgcggacatctcgagcctgaggatcgccaaaggagctgcc aaatccgatcgctttatgggagttctccagaacgtgcggtttgtctttggaacgacgctg gatgcgattttacgcaacaaaggatgcgagagctcaaccttcatcactgatgtcatgacc ttggaaaaccccgtgaacggatccagcccggccatccgcactgattacaccggacacaag tctaaagatctgcaggacatctgcggtttctcctgcgacgatctgtcgagcatgtttaag gagctcaagggactcggcatggtggtgaagcagttgtcaaacgagctccgccaagtgaca gcagacaacaacttaatcatgactcagattaaaatccacgaaggggtttgtctgcacaat ggcatcgtttacagagacaaagacgagtggacggtggacagctgcacccactgcacatgt cagaactccgccactgtgtgccgtgaaatctcttgtcctctcatgccctgtgccaacgcc accgtccctgacggcgaatgctgcccacgctgtggaacaccgaacgatgcgggtgtggac ggctggtcgccctggtcagaatggacacactgttcggtgacctgcggcagaggcattcag cagcgcggacgctcctgtgaccgaatcaacagcaactgcgacggcacgtctgtccagacg agagattgttacacgcaagaatgcgacaaacgcttcaagcaggacggcggctggagccat tggtccccctggtcttcttgctcagtgacgtgtggcgagggcatcatcactcgcatccgg ttgtgcaactcccctacgcctcagatgggcgggaaagactgtgagggagatggtcgtcag accgaaccgtgccagaaggatccgtgcccagtgaatggaggttggggaccctggtcacca tgggactcttgctccgtcacgtgcggtggaggactgcagcgcagacaccatctgtgtaac agccccgctcccaaatacggtggaaaagaatgtatgggtgactccaaaggcacccgtttg tgcaacgcccagtcgtgtccagttgatggatgcctgtctaacccgtgcttcgccggcacc aaatgcaccagcttccccgatggctcctggaagtgcggcgagtgtccggttggatacact ggggatggagtccactgtcaagacatcgacgagtgcaaagaagttcctgatgcctgtttc gtgctcaatggagtccaccagtgtgtgaacacagaaccaggctacaactgcctgccctgc cctccacgctactctggacagcagcccttcggcaggggaacggaccaggccattgccaac aaacaggtctgcacacctagaaacccatgtgaagacggcagccatgactgcaataagaat gccaactgcatctacctaggcatcttctctgacatcatgtaccgctgcgaatgtaaacca ggctatgctgggaacggttacatctgtggaggggactctgaccttgacggctggccaaac acggacctccactgtgtggaaaacgccacctaccactgcaagaaggacaactgtcctgac cttcccaactctggtcaagaagactatgacaaagatggaactggagatgcttgtgataat gatgatgacaacgatgggatccctgatgacggggacaattgcccgttcatctttaaccca agacagtacgaccatgaccgcgatcaagttggtgacacatgcgataattgtccatatgac agtaatccagaacagaccgacaccgacaacaacggcgagggtgatgcgtgtgccattgac atcgatggtgatggcatcctgaatgagaaggacaactgtccatatgtgtacaacactgac cagagagacagtgacggagacggagtcggtgaccactgtgacaactgcccactggagcac aaccctgaccagatcgactctgactctgacaacattggagacaagtgtgacaacaaccag gacatagatgaggatggacatcagaacaacctggacaactgtccctacatctccaacgcc aaccaggtcgaccacgacaaggatggcaaaggagacgcctgcgatcacgacgacgacaat gatggtgtgcctgacgacaaagataactgccgactcgccttcaacccagatcaactggat tcggacggagacgggcgaggcgacgtttgtaaggacgactttgacgtcgataacgtgccg gatatttacgacgtttgcccggagaactttggcatcagtgaaacagatttccgtaggttc caaatggttcctctcgatccgacgggaacttcccaaatcgaccccaactgggtcgtccgt caccagggcaaagaacttctgcagaccgtcaactgtgatcctggcattgctgttggttat gatgagttcaatgccgtggactttagcggcacgttcttcatcaacacagaccgtgacgac gactacgccggctttgtgtttggctaccaatccagctcacgtttctacgtggtgatgtgg aaacagatcacacagacctactggtctcatacacccactaaagcacaggggtactctgga ctgtccattaaagtagtgaactcgaccacaggaccgggcgaacatctcaggaacgctttg tggcacactggagacaccgagggacaggtgcgtaccttgtggcatgatcccaagaacatt ggctggaaggattacaccgcctacagatggcacctgatccatagacccaaaactggacac atcagagtcattatgtatgaaggcaagaaagtcttggctgattcaggaagcatcaatgac aagacatatgccggaggaagacttggcctctttgtcttctctcaagagatggtttacttc tcagacctcaaatacgaatgccgagatgcatcttaa

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