Sinocyclocheilus rhinocerous: 107720701
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Entry
107720701 CDS
T04916
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107720701
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107720701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_CELSR2_9th
BppU_N
HpiC1-like
C3_CUB1
Motif
Other DBs
NCBI-GeneID:
107720701
NCBI-ProteinID:
XP_016383984
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MRTQIQRRILLWPALWLLCFAVLWRDTEAQLRYTIPEELKEGSVVGNVAKDLGLDVSEIS
NRKLRIASESGKQYFSLNLRNGELLVNDIIDRENLCGQSASCVLPVQVIIEDPLQFYRVE
VDIQDINDNSPSFLSDTKNIDVSETTLTGAKFHLEPAQDTDVGSNSLRTYALNKNEYFVL
HVKNDNDGTKVPEIVLQKALDREKQSIHHLILTGIDGGDPARSGTTQITVKVLDANDNAP
AFEQDLYGIKVTENSAQGTVIQIVKAIDLDDGVNSEIEYSLGSLTPEAIKQLFSIDSDTG
ELTISKSLDYEISSTYKFDIRARDKGAPVMEGHCRVQVNVLDVNDNAPEITVTSSPKPVP
EDAPAGTMVALINVKDLDSGVNGNVTLGISPDTPFKLKPTFSNHYALVTDSQLDREKFPR
YDIELKASDAGSPPLISSKLITVNILDVNDNPPVFSEHVYSVYIKENTAPGSILASVTAS
DLDTGENAKIVYSVLDTNTQGVPVSSYVYINSENGSIFSMHSFDYETMKVFHIIVLAKDH
GSPPMSSNATVHVFISDQNDNAPAVIYPSTSMGSVSHQRMPRSSKAGHLVTKVTAVDADS
GHNAWLFYRLAEATDAFLFSVNLHTGEVRTKRAVSEHDDSSQRLLIEIKDNGEPIQSTTV
TVDIMIEEGIHETISDYSMKTTENNNKKNGKITLYLIISLGTVSLLSVLTLFTLIVKCVR
SSIGSSSCCIRRTNSEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSE
FSDLTLVKPSSTTNFTDTLNVLDASLPDSAWTFESQQQKPPNADWRFPPNQRPGPSGQHR
FHTLQQRWTPYEKSRAGARPDEAGASAGVIAGTGPWPNPPTEAEQLQALMAAANEASEAT
ATLGPRYNPQYGPDYRQNVYIPGSTATLTANPQQQVPQQALPPPQALPPVEVPKAAQTPA
SKKKPTKKDKK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaatacaaaggaggattttgctctggccggcgctgtggctgttgtgtttc
gctgttttgtggagagatacagaggcgcagcttcgttatacaataccggaggagcttaag
gagggatctgttgttggaaatgtagctaaagatctcggtttggatgtatctgagatatct
aatcgtaaattacggatagcatctgagtctggtaagcaatattttagtctaaatttgcgg
aacggcgagctgcttgtgaatgatattatagacagagaaaacctgtgcggacaaagcgcg
agttgtgtgttaccagtgcaagtcattatcgaggatccactccagttttatcgtgtagag
gtggacatacaagatattaacgacaactctccgagtttcctttcagacacaaaaaatatt
gatgtatcagagaccacgctaaccggagctaaatttcatttagagcctgcgcaagacaca
gatgtggggtcaaactctttgcgcacgtatgctttaaataaaaatgaatattttgtctta
catgttaaaaatgacaatgacggaacgaaagtcccagaaattgttttgcagaaagcactt
gatagagaaaaacagtctatacaccatctgattttgacaggtattgatggaggtgatcca
gcaagatctggcactactcagattactgttaaagtgttggatgcaaatgacaatgctccg
gcatttgaacaagatttatatggtattaaagtgacggagaactctgctcaaggtacagtc
attcagatagtaaaagcaattgacttagacgatggagtaaatagtgaaatagagtattcg
ttaggatctctcacaccagaagcaataaagcagttattttccattgactcagatactggc
gaattaaccatatcaaagagtcttgactatgaaattagctccacgtataaattcgacata
cgcgccagagacaaaggagcgcctgtaatggagggacattgtagagttcaggtgaatgtt
ttagacgtgaatgataatgcacctgagatcaccgtcacctcctcacccaaacctgtgcca
gaagatgcgcccgctgggactatggtagcgttaataaatgttaaagatttagattcgggg
gtaaacgggaacgtaacgcttggcatttcacctgataccccatttaaattaaagccaaca
ttttcaaatcattatgcactagtaacagattcacaattagatcgagaaaagtttcctaga
tatgacattgagctaaaagcctcagacgctggatcacctccactgatatctagcaaactc
attacagttaatatactagatgtcaatgataatcctcctgttttttctgaacatgtgtac
tcagtttatattaaagaaaacaccgctccgggatcaattttagcatcagtaacagcatca
gatctagatacaggagaaaatgcaaaaattgtctattcagttctcgatactaatactcaa
ggcgtacccgtctcttcgtatgtttatataaactctgaaaatggtagtatatttagcatg
cattcatttgactatgagacaatgaaggtgtttcacatcatcgtgcttgctaaagatcat
ggctctcctcctatgagcagcaatgccacagttcatgtgtttatttcggaccagaacgat
aatgcacctgctgtcatttacccgtccacatccatggggtctgtctcccatcagaggatg
ccccgttcttcaaaagcaggacatctcgttactaaggtaacagcagtggacgcggactcg
ggtcataacgcctggctgttctacaggctcgcggaggccacggacgcgtttctgttcagt
gtcaatttacatacgggagaggtgaggactaaacgcgctgtttcagagcacgacgactcc
tctcagagactgctgatagaaataaaggataatggagaaccgatccagtccaccacagtc
acagtggatataatgatagaggaaggcattcatgagacaatctcggattatagtatgaaa
actacagaaaacaacaacaagaaaaacgggaaaataactttatatttgataatttcgttg
ggaacagtgtcacttttatctgtcttgacattgttcacgttgattgtgaaatgcgttaga
agcagcatcggaagttcaagctgctgtatcaggaggacaaattctgaatacaagaacccc
aacagaaacctgcagatccagctcaacactgacgggcccattaagtatgtggaggttctg
ggaggagacatgatgtctcagagtcagtcctttggctcctatctctctccaatgtcagaa
ttcagtgatctcaccctcgttaaacccagcagcaccacaaactttacagacacgctaaac
gtgcttgacgcgtcattaccagacagcgcgtggacgtttgagagccaacagcaaaagccg
ccaaatgctgactggcgatttcccccaaaccagaggcctggacctagcggccaacacagg
ttccacaccctgcagcagagatggactccatacgagaagtccagggctggagctcgtcct
gatgaggcaggtgccagcgctggtgtgatcgcaggaacaggaccgtggcccaacccccct
accgaagctgaacagctccaggctctgatggcagcagcgaacgaagcaagtgaagccact
gcaactctcggccctcgctacaatccacagtacggcccagactaccgccagaacgtctac
atccctggcagcaccgccaccctgacggccaaccctcagcagcaggtaccccagcaggcc
cttccccctccccaagcccttcctcccgtcgaagtccccaaggcagctcagacgcccgct
agcaagaagaagcctactaagaaagacaagaagtaa
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