Sinocyclocheilus rhinocerous: 107721311 Help Entry 107721311         CDS       T04916                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04115   p53 signaling pathway srx04145   Phagosome srx04148   Efferocytosis srx04350   TGF-beta signaling pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107721311   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107721311  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107721311    04148 Efferocytosis     107721311   09143 Cell growth and death    04115 p53 signaling pathway     107721311   09144 Cellular community - eukaryotes    04510 Focal adhesion     107721311   09142 Cell motility    04820 Cytoskeleton in muscle cells     107721311  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107721311   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107721311 Membrane trafficking [BR:srx04131]  Endocytosis   Phagocytosis    Opsonins     107721311 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107721311 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  107721311 NCBI-ProteinID:  XP_016384736 UniProt:  A0A673N2L4 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MKSTAIFLLLMLWTCESARVAESRDDNSVYDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPIFEIIS NGKANTLDIVFSTESKQQVVSIEEADLAVGHWKNITLLVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNMRFVFGTTLEAILRNKGCQNSIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSSELRKV TDEKNMLMSRMGIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKDCQGEGR QTERCEKSPCPINGGWGPWSPWDTCSVTCGGGVQNRKRLCNNPVPMYDGKDCVGDAKASQ ICNKRACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGINCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGRGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGQFSDPMYRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCAY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNIDQKDTDLDGVGDQCDNCPLE HNPDQVDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcaactgcaatctttttgctactgatgctttggacctgcgagagcgcgagagtc gcagaaagtcgagacgacaacagtgtttacgatctgtttgagctcgtccaagtgccgagg aaaaaccacggggtgactctggtgaaaggcgacgatccgtatagccccgcctacaagatc ctgaaccccgacctgattcccccggttcccgagagcgccttcagggacctgattgattcc atccacgcggagagaggatttctgcttctgctcaacttcaaacagttcaaacacacgaga ggaagccttctgaccgtggagaagaaagatggctccggacccatcttcgaaataatttcc aatgggaaagccaatactctggacattgttttttccactgaaagcaagcaacaggtcgtg tccatcgaggaagcagatttggctgtgggacattggaaaaacatcacgcttttagtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaatacagcagagctcgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcctgaggatcggcaag ggcgcagtgaaggacaggttcatgggggtgttgcaaaacatgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgccaaaactcaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggaactgaaaggtcttggtgtggtggtgcaagagctgtccagtgaactccgcaaagtg acggatgagaaaaacatgctcatgagtcgcatgggcattcatgctggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaggaatggacagtggacgattgcacagagtgcact tgccagaactctgcaacggtgtgccgcaagatttcatgccccctaatcccatgtgcaaac gccacagtgcctgatggggagtgctgccctcgatgtggaaccccgagcgattccgctgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgcgaccgcatcaataacaactgcgagggcacgtcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcagctggagt cactggtcaccctggtcttcctgctcagtcacctgtggtgctggcgttatcacgcgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagattgccagggtgaaggtcgg caaactgaaaggtgtgagaaatcaccatgtccgatcaatggtggctggggaccatggtca ccctgggatacttgctctgtcacctgtggcggtggagtccaaaaccgtaaacgtctttgc aataatccagtacccatgtatgacggcaaagactgtgtgggagacgcaaaggccagccag atttgcaacaaacgagcctgtccaattgatggatgcctttcaaatccttgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccccacaggatac actggcaatggaatcaactgcaaggatatcaatgagtgcaaggaggtccctgatgcctgc tttgaatttaatggagtccacaggtgtgagaacacagtgccaggctacaactgcctgcct tgcccctcacgctacaccggcccacagccgtttggtcgaggagtggaggacgctgcttcc aagaaacaggtctgcacgcctcgtaatccctgcctcgatggaagccacgactgcaataag aacgctcgctgcaactacctgggccagttttcagaccctatgtaccgctgtgagtgcaaa cctggctatgctggaaatggacacatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaacgcaacctatcactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggagttggtgatgcttgtgat aatgatgatgacgacgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtacgactacgatcgcgatgacgtgggagaccgctgcgacaactgtgcgtac aacagcaacccagaccagaccgacactgacaacaatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacatt gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggaa cacaacccagaccaggtcgactccgattctgaccgtgttggagacaaatgtgacagcaac caggatatcgatgaggatggtcaccaaaacaacctggacaactgcccgtacatccccaat gctaaccaggctgatcacgacaaggatggtaaaggagatgcttgcgactacgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgactttgaccaagacaatgtc ctggatatctatgatgtctgtcctgagaactttgacatcagtgaaacggacttccgcaaa ttccagatggttcctctggatcccaagggcacttctcagatcgaccccaactgggtggtt cgtcaccaaggaaaagaactggttcagacagtcaactgcgaccctggcattgctgttggt tttgatgagttcaattcagtcgacttcagtggaacgttcttcatcaacactgagagggat gatgactacgccggcttcgtttttggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctaccaaggcacagggttactcg gggctgtcaatcaaagtggttaactccaccacagggccaggcgagcatctgagaaacgcc ctgtggcacactggagacactccaggacaggtgcgcacactgtggcatgacccaaagaat gtgggatggaaggacttcactgcttacagatggcatttgactcatagaccaagaactgga cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacttatgcaggcggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

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