Sinocyclocheilus rhinocerous: 107722967
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Entry
107722967 CDS
T04916
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107722967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107722967
Membrane trafficking [BR:
srx04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
107722967
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
UPF0181
Motif
Other DBs
NCBI-GeneID:
107722967
NCBI-ProteinID:
XP_016386955
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MISSPDLVAFTKETYFSEIAKDPSALPEELSVPMYPYTGDTTPWSTMSGANFKKDFILLS
EFSEQVGPQPLLTVPPETKACGTFDLNHFSLRIMSVDYQTSLTSLAGCGSLKLNFVEDSK
VVLGDSGEGAFAYVHHLTLYDLEARGFVRPLCLAYVSSDENKIIQQFQQLSAEFSKVSEY
LKTGNRKNFANELEIKLRDLEYTRVMLLREIERELNNASFSRKAEVECEKGNRSCITHDR
DERFGERRKSKQDKGSCPMPLANKGEELACVEKSIQEYKSLLKQISCYPTRKLRDSEYSP
YEPDDLPHCFEFDLDDLRHGQLAGPMLEYNVFSCINTPSHSLQLINSTSSCRFDKHLKTL
EELCNDYFHHQALQQLYSIERTFRGDACHLYSQQLCHNHLRNLKSTNFLFEDPCDLEEEA
GLQIGIAGQHSVRQPSFLPAPSILSEPASLESYVSCVEMVPIKLELGGPSQFPAVPSSLN
TPSEDNLRLTSDTSLVETEMENGGVVSTSDCLENVEYVSALMKTSISSGDSIEVLGTEKS
FRSQGSNIPLDTALQRPPPLSTTAALEGLRQGRVPIRRTCSEDSIEVLGTTESILPEELR
ASYPCAINEESPDQETAEKDMSQNQEDKQVECVYSVGNKVPKDHGEACMEEPQDFYPAAT
LTPPDCPMTLTLGGSSSQDTCHASELIPLSLLDEPCLIVSDDFSDCFSYRSTTASTTSEC
TFSACLPRNKREGGTRRRRGRVGRAALQFLRQFPFAVHAVFSLLSGRTLVVLGSEEAAVR
RLVTALSVYMPHLSG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgattagctctccagacttggtggctttcactaaagaaacatatttcagtgaaatagcc
aaagacccctcagcacttcctgaggaactgtctgttcccatgtatccctacactggggac
accaccccatggtccacgatgtctggtgctaattttaagaaggactttatccttttatca
gagttttcagagcaagttgggccgcagcctttgcttacagttcctcctgaaaccaaggct
tgtggaacgtttgatttgaaccacttctcccttcggatcatgtcagtggactatcagacc
tcgctcaccagcctggcaggttgcggctctttgaaactgaactttgtagaagactcaaaa
gtagttttaggggattctggagaaggagcatttgcatatgtgcaccaccttacgctctat
gacttggaggctcgagggtttgtgcgacctctctgccttgcctatgtgtcgtctgatgag
aataaaattatacagcaatttcagcagctttccgcagagttctccaaagtctctgaatat
ctaaaaacagggaacaggaagaactttgcaaatgaactggagataaaactgagagatttg
gagtataccagagtcatgttacttagagaaatagaaagagaattgaataatgcatctttt
tcaagaaaggcagaagtagagtgtgaaaaagggaataggtcatgtattacacatgataga
gatgaacgatttggagagcgaaggaagagcaagcaagacaaaggatcttgcccaatgcca
ttggctaacaaaggtgaggaactggcctgtgtagaaaaatccattcaggaatacaaaagc
cttctaaaacagatctcctgctacccaaccaggaagcttagagactctgaatactctcct
tatgaaccagatgacctccctcattgtttcgagttcgacctggatgatttaaggcatggt
cagcttgctggaccaatgctagaatataatgttttttcttgcataaacacaccctcacat
tctctgcagctgattaactctacttcatcttgccgatttgacaagcatcttaaaactctc
gaggagttgtgtaatgactacttccaccatcaggcgctacagcaactgtactccattgag
aggacattcagaggagatgcctgccatctctactcacaacaactctgccataatcatctt
cgcaacctcaaatctaccaatttcttatttgaggatccatgtgacttggaagaggaagcg
ggattacagattggaatagccggtcaacattcagtccgacaaccctcatttcttcctgca
ccttcaattctaagtgaacctgccagtctcgagtcatatgtctcctgtgttgaaatggtg
ccaatcaaactagagttgggtggacctagtcaatttccagctgtacccagctctttaaat
accccttccgaggataacctacgtcttacatccgacacctccttagtagagactgaaatg
gaaaatgggggggttgtttcaacttcggattgcctagaaaatgtggaatatgtttcagct
ttgatgaagaccagtattagtagtggagatagtattgaggtcttagggacagagaagtcc
ttcagatcccagggttcaaatataccattggatacagcactgcaaagacctccacctttg
tccactacagctgcactggagggtctaaggcaaggaagggtacctatcagacggacttgc
agtgaagacagcattgaggtgcttggcacaacagaatccatcctacctgaagaactgcgt
gcttcatacccttgtgcaattaatgaggaaagcccagatcaagagactgctgagaaagac
atgtctcaaaaccaagaggacaaacaagttgagtgtgtttacagtgtgggaaacaaagtc
cctaaagatcatggagaggcctgtatggaggagccacaagatttttatcctgctgccacc
ttaaccccacctgattgtcctatgactttgaccttgggtgggtcaagctctcaagatact
tgtcatgcatcagaattaattcctctctcgttgttagatgagccctgcctgatagtatct
gatgatttctcagactgctttagctatcggagcaccactgcttctacaacctccgaatgc
actttctctgcttgtcttcccaggaataaaagagaaggtgggaccagacggagacgtggc
agagtaggacgagcagcattgcaattcttgcgacagtttccctttgcagtccatgcagtg
ttcagccttctgagtggccgaacattggtagtactaggcagcgaggaggctgcagtgagg
cgactggttacagcactgtctgtgtacatgccacatctgagtggatag
DBGET
integrated database retrieval system
