Sinocyclocheilus rhinocerous: 107723281
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Entry
107723281 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107723281
Membrane trafficking [BR:
srx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107723281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerI
dsrm_Ferlin
Motif
Other DBs
NCBI-GeneID:
107723281
NCBI-ProteinID:
XP_016387334
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MKRSKHRASKDDGKGQDEPAILETEDMRMPDPDTISLASVTAVTTNISNKRSKPDIKIEP
SAGRPVDFQVSVTVIEARQLVGLNMDPVVCVEIGDEKKYTSMKESTNCPYYNEYFVFDFH
VPPDVMFDKILKVSVIHSKNLLRSGTLVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDIT
AGCKGYVKCDVAVVKKGDTLKTPHKTNETDEDDIEGNLLLPDDVPAERQWAKFYVKIYRA
EGLPKMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQKGKTSIQKSSYEPIWNEQIVFTE
QFPPLCQRMKVQIRDSDKVNDVAIGTHFIDLRKIANDGDKGFLPTLGPAWANMYGSTRSY
TLMDEYQDLNEGLGEGVSFRARLLISLAVEILDTSSAEVMCSTEVQVEGVPNISDNATGK
IEEFFLFGCFLEATMIDRKIGDKPINFEVTIGNYGSELDTPTKPKTKKRKGGDDEESELI
HGSSDEEVDDGGDMTSVSSTPPMKPVITDRNYFHLPYFERKPCIFIKSWWQDQRRRLYNA
NIMDRIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSIGCSTFVTLANNDQNQTGKT
KLDRERLKLCMQELENMGQQAKNMRSQVKKSNVKDKIKLAQNFLHKLRFFSDEPQHSVPD
IYIWMISNNKRIAYARVPSKDILFSSVEEETGKDCGKVQTTFFKLPGKKSFGPAGWTVQA
KTELYLWLGLNRQRKDYLSGLPNGFEENKAVKGPGIQSSPPISLMYTMKQIFQLRVHMYQ
ARSLFAADSTGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLLVFDNVELYGEAGELRDD
PPIIVIEIYDQDTVGKADFMGRTFAKPITKMSDEHYGPPRFPPQLEYYQIYRGNGTAGEM
LAAFELLQIGPAGKADLPPIDGPSDIDRGPILPVPIGIRPVLSKYRIEVLFWGLRDLKRV
NLAQVDHPRVDIECAGKSIQSALIQNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVD
CRAFGRYTLVGSNAVTSLRKFIYRPSDKSVSNWSAMEEVVIHTVPEPAVKKTETVVKLDS
ASDAVVKVDMPDDEKGGKGKKKRKKGEEVEEEELDESMLDWWSKYFASIETLKEIIKAQE
AEAEERENFDSGEGTKKKKRGKGNKNKATPGEGAPEKKKHKIEELKMFNRELEYQFDSFE
DWLHTFNLYRGKCSDDANVEQNAADEDRLIGKFKGSLCIYKVPVFDEVSREMGFDSNMGM
FQNIPHNDPVNILVRVYVVRATELHPADINGKADPYIAIKLGKTEIKDKENYISKQLNPL
FGKSFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRFYSKHRPTCGLSASYAI
QQYIVWVKIIDFSFMPKIIRILSKDHXYGPGGRVKVANRVYTGPTEIEDESALKKQTDEH
LALAVLNRWEDIPQIGCKLVPEHVETRPLLNPDKPGMEQGRIELWVDMFPKDMPAPGPAL
DISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHS
LTGEGNFNWRFIYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNLQVWDADHFSADD
FLGAIELDLNRFPRGAKTAKQCSIDMVINEQDMPMVNIFKQKRIKGWWPFVARDENDELE
ITGKVEAELHMLTGEEAEKSPVGEGRNEPEPLEKPNRPDTTFLWFLSPLKAIHHLICKQY
KWLVIKIVLALMLLAILALFLYSMPGYMAKKLLGV
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtagcaagcatcgagcctccaaggatgatggcaaaggtcaagatgagccggcc
atcctagagacggaggatatgaggatgccagacccggacaccatctcactcgcatccgtc
actgccgtcacaaccaatatctccaataagagatcaaagcctgacatcaagattgagcct
agtgccggaagaccagttgatttccaagtcagtgtcactgtgattgaggccagacagctg
gtgggtctgaacatggatccagtggtgtgtgtagaaattggtgatgaaaaaaaatacacc
tcaatgaaggagtcgaccaactgcccttactacaatgagtacttcgtttttgacttccac
gttcctcctgatgtcatgtttgacaagatcctgaaagtgtcagttatccactctaagaat
cttttgcgaagtggcacgctggtcgggagcttcaagcttgacgtgggcacagtttataca
caacctgaacatcagttcttccacaaatgggccactttatgtgaccccgatgacatcact
gcaggatgcaaaggctatgtcaagtgtgacgtcgcagttgttaaaaagggcgacactctg
aaaactccacacaaaacaaatgaaacggatgaggatgacatcgagggtaatcttctgttg
ccggatgacgtcccagctgagcgtcaatgggcaaaattctatgtgaaaatctaccgagct
gaggggttgcccaaaatgaacaccagcattatggcaaacgtcaaaaaagccttcattgga
gaaaataaggacttggttgatccgtatgtccaggtgcaatttgcaggacagaagggaaaa
acttcaattcagaagagcagctatgagccgatctggaatgagcagatcgttttcacagag
cagtttccacctctgtgccagagaatgaaagtccagatccgcgattcggataaagtgaac
gatgtggccatcggaacgcacttcattgacctgcggaagattgctaatgatggagacaaa
ggctttcttccgactcttgggccggcttgggccaacatgtacggctccacacgcagctac
acgctcatggacgagtaccaggacctgaatgaaggactaggggaaggggtttcgttcagg
gcccggctgctgatcagtctggctgtggagatactggatacctcctctgctgaagtaatg
tgctccactgaggtgcaggtggagggagttcccaacatctcagataatgccactggaaaa
attgaggagttctttctctttggatgtttccttgaggccactatgattgacaggaagatt
ggagacaaacccatcaactttgaggttacaataggaaactatggcagtgaactcgatact
ccaaccaagccaaaaacaaagaagaggaagggtggcgatgacgaggagtctgagctcatt
cacggctctagtgacgaggaggtggatgatggtggagatatgacctcagtttccagcact
cctccaatgaagccagtcatcactgacagaaactatttccacctcccgtactttgagagg
aagccctgcatttttatcaagagctggtggcaggaccaaagaagacgactttataatgca
aacatcatggacagaattgcagataaattggaagaagggttaaacgatgtgcaggagatc
attaaaacagagaaagcctatcctgagcgcagactcagaggagtcctggaggaactcagc
attggctgcagtacctttgtaactttagcaaacaatgatcagaatcagactgggaagact
aaactggaccgggagagactgaaattatgcatgcaggaattggaaaacatgggccagcaa
gcaaagaatatgcgatcccaagtaaagaaaagcaacgtgaaagacaaaataaaactggca
caaaacttcctccacaagctgagattcttttctgatgagcctcagcatagtgttccagat
atttacatatggatgataagcaacaacaagcgcattgcatatgcccgcgttccctccaaa
gacatcctcttctcttctgtagaggaagaaaccggaaaggactgtgggaaagtccagacc
acctttttcaagctccctggtaagaaaagctttggacctgcaggctggaccgttcaggct
aaaactgagctgtatctgtggctcggcttgaacaggcagcgtaaggactacttgagcggc
ctaccaaatgggtttgaggagaacaaggcagtaaaagggcctggcatacagtcctcaccc
cctataagcctgatgtacaccatgaagcagatcttccagctgagggttcacatgtatcag
gctcgcagtctgtttgcggccgacagcacgggcctgtcagacccttttgccagggtattt
ttttctactcacagccaggtcacagaggtcctgaatgagacgttgtgtcctacatgggat
cagctgctggtgtttgataatgtggagctctatggtgaggctggtgaactgagggatgat
cctcctataatcgtcatcgagatctatgatcaggacactgtcggaaaagccgatttcatg
ggtaggacattcgctaaacctataaccaagatgtcagatgagcattatgggccgccacgc
ttccctcctcaactggagtactaccagatctaccggggaaacggcactgcaggagaaatg
ctggcggcctttgagctgctgcagattggaccagctggaaaggccgacctgcccccaata
gatggaccttcagatatcgatcgtggtccaatcctgcctgttcctattggcataagacct
gtcttgagtaaataccgaattgaggttctcttctggggcctgagggacttgaagcgggtg
aatctggctcaagtagaccacccccgtgtggacatcgagtgtgcagggaaaagcattcaa
tcagcgctaattcagaactacaagaaaaaccccaacttcagcactctggtgaagtggttt
gaagtggacctgcctgagaacgagctcctccatcctcctctgaacatccgtgtggtggac
tgccgggcgtttggtcgttacacactagtcggctctaatgctgtcacatctctacgcaaa
ttcatttacaggccatcggacaaaagtgtcagtaactggtctgccatggaggaggttgtg
atccacacagtgccagagccagctgtgaagaagactgagacagtggtcaaactcgactca
gcatctgatgctgtggttaaagtcgatatgccagatgatgagaaaggtgggaaagggaaa
aagaagcggaagaagggtgaagaggtggaagaggaggagctggatgaaagcatgctggac
tggtggtccaaatactttgcctcgattgaaacactgaaagagatcattaaagctcaggaa
gcagaagctgaagaaagggaaaattttgactctggagaggggaccaagaagaagaagaga
ggaaaggggaacaagaacaaagccacgcctggggagggagcaccagagaagaagaagcac
aaaatcgaagagttgaagatgttcaacagagagcttgaatatcagtttgacagctttgaa
gattggcttcacactttcaacctttatcgaggcaagtgttcggatgatgctaatgttgag
cagaatgcagctgatgaagacagactcattggcaaattcaagggatccctgtgcatctac
aaagtcccagtgtttgatgaggtgtccagagaaatgggctttgattccaacatgggcatg
ttccagaacatcccacacaacgaccccgttaacatcctcgtccgagtctatgtggtcagg
gcaacagaactgcatcctgcagacatcaatgggaaggccgacccatatatcgccatcaag
ctcggaaagacagagatcaaagacaaagagaactacatctctaaacaactcaaccctttg
tttggaaagtcttttgatattgaagcgacgctcccaatggattccaccctcaccgtgtcc
atctacgactgggatttggtgggaaccgatgacctgattggggagaccaagattgacttg
gagaaccgtttctacagcaagcacaggccaacctgtggtctcagcgccagctacgctatc
caacaatacattgtatgggtcaaaattatcgatttttcttttatgccaaaaatcattagg
atattaagtaaagatcatnagtacggcccagggggacgagtgaaagtggcgaacagagtt
tacacgggaccgactgaaattgaggatgaaagtgcactgaagaaacagacggatgagcac
ctggctcttgctgtactaaaccgctgggaagatattccacagatcggctgcaaactcgtc
ccagagcacgtggagacgaggcctctcctgaatccggataaacctgggatggagcaggga
aggattgagttgtgggtggacatgttcccgaaggacatgcctgcgcctggacccgctctc
gatatttcaccaaggaagccaaagaaatttgagctcagggtgatcgtgtggaacacagac
gaagtcgttctggaagacgatgacattttcacaggggaaaaatccagtgacatatttgtt
agaggatggctgaaaggtcaacaagaagacaagcaggacacagacgtccactatcactct
ctgaccggagagggcaatttcaactggcgcttcatttaccccttcgactacctacaggcc
gaagagaaaatcgtcatctcaaagaaagagtccatgttttcttgggatgagactgagtat
aaaattcctgcccgactgaatttgcaagtgtgggatgcggatcacttctctgcagacgac
ttcctgggtgcaattgaactagacctgaatcgatttcctcgtggtgcgaagacagcgaag
cagtgctccattgacatggtgattaacgagcaagacatgcccatggtcaacatcttcaaa
cagaagagaattaaaggctggtggccatttgtggcacgagatgaaaacgacgagttggaa
attacagggaaagtagaagcagagcttcacatgctgacaggtgaggaggccgagaagagt
cctgttggtgaaggacgcaatgaaccagagcctctggagaaaccaaaccgccccgacact
acattcctgtggttccttagcccgctaaaggcaatccaccatctcatctgcaaacagtac
aagtggctggtcatcaaaattgtgttggcgctgatgcttcttgccattctggccctgttc
ctctacagtatgcctggctatatggccaagaaactcctgggagtctga
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integrated database retrieval system
