Sinocyclocheilus rhinocerous: 107727877
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Entry
107727877 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein C5orf42-like
KO
K22859
protein JBTS17
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
srx03037
]
107727877
Cilium and associated proteins [BR:
srx03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
107727877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rx_N
Motif
Other DBs
NCBI-GeneID:
107727877
NCBI-ProteinID:
XP_016393403
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MGIAFADTGRLEVLXNSPSVPRMEVKLEVLLSSSIKRRKPWPRFCWLGREKEGVFLLDDN
RISEIHLVSGRTKKKTPKLQPLLQRVVTMSASQDGVWLVGLLVSGELFLWNKDKDSLKTV
SAVPEVHQLVSSIKGSATAMRLSLLVSENAQRVFLAALTGQVFLWECSSRQDLSGPRDTT
VPGRWSQISDHENIQLPSTTDKEASVHSVFVKNQAVGDACLSAFVFIAEAQLIVTFLKIQ
WDSTWDNKLSSAGFSVGWVSQSYPLNQLLPPCKPLKSRGALIPAFSPDGRLLAVVLNQKD
PQATQVLFISTQNFVTVSSLLGGCGVKTLSIPAKYVRSYWAGSVSWTPEGLYLACVLKRG
SLLMLARLGGLVSLSTTGCSVEFSAAHFLPLHPLVTYRPPVPLQTQDGGVSSSSVSLRDP
MRQRYSVTCHPRQPLLIVSDGYMVTVLRMSERPSAAAVMSAALLDAAQGLEHIQSVLGSS
QPQFRSRLESMPTLTFTGSLQPLKEKETLLSTLPLYLQDTADLTQYTERTQEDHDSDEGP
YTCSRTEDGGKLEFASMFDTLHAQTQSHPEPSSSGLQEDLDRVHRSLTRAWALGVSLGGS
VQQRERLLRYTLLCYEGPYTCSRTEDGGKLEFASMFDTLHAQTQSHPEPSSSGLQEDLDR
VHRSLTRAWALGVSLGGSVQQRERLLRYTLLCVSRLVNLLRVRDSAGRKSRSAWVTHALH
TLGTLLSFLPWDAERTAGRGCLGITVELTRCFVDMFLPLSSSDLTLSSQNFSAALVVLQR
ASQSVDRTYSLPPRAVHHGKDGQLTYSSDMFSVPLLQDDVDADAETGAQTAPSNRLVVIW
REVYKRAVRYREELRHRRGVKNELEKMSVIMPQIQQALQSAGDRLEESHTLRSFSGEQHF
IFGEYTESVQVWRTQLRAERQRVGPMTCYLETRCCLALLYTLLFQYRLRDAQGLCDRLAR
QLQTQAGRQEEETQGEADEGPVGREAACAVVQSLGRFMAAYFTNRPLCILPPHNIDVLPP
LHLPHGDLRWRELQLPTELKPAEIFQDQLEMLLGRTAGSEGDANTGTVGVEDVDLVQVSV
QEILKASVMAEVDVISQPLTRLLDAAKERAMSLPALVPPAFYLPAPPLYCPQPSPNTQDS
VRDAALVLERESRCQVSGLVQKVLMLFRAAHSSRPAAQWYISNLHRCRHLLHKIWKKASE
PKAELVPDGLRKFSTNRGFFQSGPSKDMDSVTTSKTAKFLDAPEKSTQERKGDKRSGTVE
PKAPDSTVPTVGTWEFELEDEEYTLFLDLFLSYMLGKDRLDAEESELPLLSAFSQQLRTR
ELHSVTFDMLTTLKRRQKDRKRSAQLPLFHAGHCFQTLPVTPRPPSSIGPVQSDTHSTSP
WALPGLHTGKHQGLFALRRHATLMSKDVKVNSIGTDVESTGFKILSQAELDIQMELDSSL
EARFPQLARLLEWMMRWADRRVLLSQPIRKTSEGSGDSVVIRVNASTPAVLTALELLKRR
YSAALLGENSNHSHTKGEESIAQPITGWRRDRESSVDTGYPGSAGTPITLPELEVQDAHE
SEDQTDDQLSEREDTVISDEQKNISETRDIRQTSAATDDESSAADVTEASWANQSRAHRD
QVTNDFIHH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgggaattgcgttcgctgatacaggccgactggaagtcctctgaaactcaccatcggtg
ccaagaatggaagtgaagttggaggttttgctgtcatccagcatcaagcgcagaaagccg
tggcccagattctgctggctgggcagggaaaaggagggtgtttttctgttggatgacaat
cggatcagcgaaatacatttggtttcgggacggaccaaaaagaagaccccaaaactccag
ccgctgttgcagagggtggtgaccatgtcagcgtctcaggatggcgtgtggctggtgggt
cttctggtctctggagaacttttcctgtggaacaaagacaaggattcgttgaagacggtc
tcggctgttcccgaggttcatcagctggtttcttccatcaaaggttcagcgactgcaatg
cggctctctctgctggtttcggagaacgcacagagagttttcctggccgctctcacagga
caggtgttcctctgggaatgttcttctcgtcaggatctgagcggcccgcgggacaccaca
gtccccggacgctggagtcagatatcagaccacgaaaacattcagctgccctccacaaca
gacaaagaggcttccgttcatagtgtgtttgtgaagaaccaggcagttggtgacgcgtgt
ctgagcgcatttgtcttcattgctgaagcgcagctcatcgtcacctttctgaagatccag
tgggactcgacgtgggacaacaaactcagctcagcaggtttcagtgttggctgggtctct
cagtcgtacccgctcaaccagctcctgcctccgtgtaaaccgctgaagtccagaggcgct
ctgatcccagcattctctccagacggtcgactactcgccgtcgtcctcaaccagaaagac
ccgcaggcgacgcaggtgttgttcatcagcactcagaactttgtgaccgtgtccagtctg
ttaggagggtgtggcgttaagacgctcagtataccagctaaatatgtgaggtcgtactgg
gccggttctgtgagctggactccagaagggctttatctggcctgtgtgctgaagagaggc
tctctgctcatgctggcgcgtctcggtggactcgtgtctctgtccacaacaggatgcagc
gttgagttcagtgccgcccacttcctgccgcttcacccgctggtcacttacagacctcca
gtgcctttgcagacgcaggacggtggcgtctccagctccagcgtgtcgctccgtgacccc
atgagacagcgctactccgtcacgtgccatcctcgtcagccgctcctcatcgtgtccgac
ggctacatggtgactgtgctcaggatgagcgagcggccgtctgctgccgccgtgatgagc
gccgccctgctggacgctgcgcagggactggagcacatacagagtgtcctgggctcgtct
cagcctcagttcaggtccagactggagtccatgcccactctgacgttcacaggaagtctt
cagcctcttaaagagaaagaaacgcttctgtctactctacctctgtacctgcaggataca
gcagacctcacacaatatactgagagaactcaggaagaccatgattctgatgaaggtccg
tatacctgctcacgcacagaagacggaggcaagctggagtttgcgtctatgtttgacact
cttcacgctcagacacagtcacacccagagccgtcgtcctcgggtctgcaggaggatctg
gacagggttcacaggagcctcacgagagcctgggctctgggcgtttctctgggcggctcc
gtccagcagagagagcgtctcctcaggtacaccttgctctgttatgaaggtccgtatacc
tgctcacgcacagaagacggaggcaagctggagtttgcgtctatgtttgacactcttcac
gctcagacacagtcacacccagagccgtcgtcctcgggtctgcaggaggatctggacagg
gttcacaggagcctcacgagagcctgggctctgggcgtttctctgggcggctccgtccag
cagagagagcgtctcctcaggtacaccttgctctgtgtctctcgcctcgtgaacctcctg
cgggtcagagactccgccggcaggaagagcaggagcgcgtgggtcactcacgcccttcac
accctcgggacgctgctgtcctttctcccgtgggacgccgaacgcaccgcaggccgcggc
tgtctgggcatcactgtagagctcactagatgtttcgtggacatgtttctcccgctttcc
tcctccgatttaacactttcctcccagaacttcagcgcagcgctcgtcgtccttcagcga
gcgtctcagagtgtggatcggacctacagcctcccgccgagagcagtgcatcatgggaag
gacggccagctgacatattcctctgacatgttttctgtcccactgttacaagacgacgtt
gatgctgatgccgagacaggagcacaaacagcaccttctaacagattggtggttatctgg
cgtgaggtgtacaaaagggctgtgcggtaccgggaggaattacgtcaccgcagaggcgta
aaaaacgagctcgagaagatgtcagtaattatgcctcaaatccagcaagctttacagtca
gctggagaccgtcttgaggagagccacacactgcgtagtttcagcggtgaacagcacttt
attttcggagaatatacggagagcgttcaggtttggaggactcagctgagggcagagaga
cagagagtcggaccgatgacgtgttacctggagacccgctgctgtctggctcttctctac
acgctgctcttccagtatcgactgcgagatgctcaaggtctgtgtgaccgtctggcacgc
cagttacagacacaagcaggacgacaggaagaggaaacgcaaggagaagctgatgagggt
ccggtggggcgtgaagcggcctgtgctgtggttcagtctctgggcaggtttatggctgcg
tacttcaccaaccggccgctgtgcattctcccgccacacaacatcgacgtgctgccgcct
cttcacttaccacacggtgacctgcgttggagagagctgcagcttcccaccgagctgaag
cctgcagagatattccaggatcagctggagatgctactgggccgaacggctgggtctgaa
ggagatgctaacacaggcacagtgggtgtcgaggacgtggatctggttcaggtctctgtg
caggagatcctgaaggcgtctgtcatggcggaggtggacgtcatctctcagcctctaaca
cgacttctggacgcagccaaagagcgagcgatgtcacttcctgctctggttcctcctgcg
ttctacctgcctgctcctcctctgtactgtccacagccttcaccgaacacacaggactct
gtgagagatgcagctctggttctggagagggagtctcgctgccaggtttctgggctggtt
cagaaggttctgatgctcttcagagcggcacacagctctcggcccgcggcgcagtggtac
atcagcaacctgcatcgctgcagacacctactgcacaagatctggaagaaagcgtctgaa
cccaaagcagaattggttcctgatggactgcggaaattctccactaatcgtgggttcttc
caatcagggcccagcaaagacatggatagtgtcactacttctaagacagcaaaatttctg
gatgcacctgagaaatcaacacaagaaagaaaaggagataaaagatcaggcacagtggaa
cccaaagcaccagactcgactgtacccacagtgggaacctgggagtttgagctggaggat
gaggagtacacgctctttctagatttgttcctcagctacatgctgggaaaagacagactg
gacgctgaggagtcagagctgcctttactgagtgctttctcacaacagctccgtactaga
gagctgcactcggtgacctttgacatgctgaccactctcaaacgccgtcagaaggatcgg
aaacgaagtgcgcagttacccctcttccatgccggtcactgcttccaaactctcccggtt
actcccagacctccgtcatccatcgggccggttcagtccgacactcattctacgtcacca
tgggctcttcctggactccatactgggaaacatcaaggtctttttgcccttcgtcgacat
gctaccttaatgtccaaagacgttaaagtaaattcgattggcacagatgtcgagtcaaca
ggctttaagatcctctctcaggctgaattagatattcagatggagctggactcctctctc
gaggcccggtttcctcagctggcccggctgctggagtggatgatgcgctgggccgacagg
cgggttctgctctctcagccaatcagaaagacctcagagggctccggtgattcggtggtc
atcagggtcaacgcctcgacccctgcagtgctgacagcgctggagctgctaaagcggagg
tacagcgccgccctgctgggagaaaactcaaatcactcccatactaagggggaggagtct
atcgctcagccaatcacaggctggaggcgggacagagaaagcagtgtggacacgggttac
ccggggtcagcagggacgcccatcacactcccggagctggaggtccaagatgcgcatgaa
tccgaggatcagacggatgatcagctgtctgaacgtgaggacaccgtgatctctgatgaa
cagaagaacatcagtgagacccgagacatcagacagacatctgcagctacagacgatgag
agcagcgccgctgatgtcaccgaggcatcatgggccaatcagagcagagctcacagagat
caggtgactaatgatttcatacatcactga
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integrated database retrieval system
