Sinocyclocheilus rhinocerous: 107730254
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Entry
107730254 CDS
T04916
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04120
Ubiquitin mediated proteolysis
srx04140
Autophagy - animal
srx04144
Endocytosis
srx04620
Toll-like receptor signaling pathway
srx04621
NOD-like receptor signaling pathway
srx04622
RIG-I-like receptor signaling pathway
srx05132
Salmonella infection
srx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107730254
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107730254
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107730254
04140 Autophagy - animal
107730254
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107730254
04621 NOD-like receptor signaling pathway
107730254
04622 RIG-I-like receptor signaling pathway
107730254
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107730254
09171 Infectious disease: bacterial
05132 Salmonella infection
107730254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107730254
04121 Ubiquitin system [BR:
srx04121
]
107730254
Enzymes [BR:
srx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107730254
Membrane trafficking [BR:
srx04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107730254
Ubiquitin system [BR:
srx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107730254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-TRAF_2
TRAF3_RING
Sina_ZnF
DM
TRAF6_Z2
RING_XB3-XBAT31
U-box
DUF4472
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
107730254
NCBI-ProteinID:
XP_016396513
UniProt:
A0A673IJ30
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MACSDTEKLSLDVEPYCDGDLSGCAAAMEKERESYLSPTENPSTISVSASIPPDQQGYDV
EFDPPLENKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQKCPVDNEVLLEEQLF
PDNFAKREILSLSVRCPNVGCSDKMELRQLEKHLSQCKFATVQCPQCLESVRKSHLDEHK
SEQCIQRLMTCPACAGSFVYANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKA
PVACTFRTFGCHVKMPRNELAQHMQEFTQMHMRCMAEFLRSQTLNSCSVPSFATHSSSDE
RGASARAPDSCQCRPELMNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELRRKLS
SLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHL
QTPSAPRCSNYISLFVHTMQGEFDSQLSWPLQGMIQLAVLDQAEGQHHVEVMETKPDLQA
FQRPTVQRNPKGFGYVTFLHLQALRQRGFVKEDVLLVRCEVTPRFDASLRREGVQPRGSE
PSL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcagtgacaccgagaagctcagccttgatgtggagccctactgtgatggcgac
ctctccggttgtgcggcagccatggagaaagaaagggagtcctatctgagcccgacagag
aacccctccaccatcagtgtctctgctagtatccctccagaccagcaaggctatgacgtg
gagtttgaccctccgctagagaacaagtatgagtgccctatctgtctgatgggtcttcgc
tcggcagtacagacaccatgtggacatcgattctgcaactcctgcatcaagaagtccatc
agggacacagggcagaaatgtccagttgacaatgaggtgctgcttgaggaacagctcttc
cctgataactttgccaaacgagagattctctcactgtctgtccgatgtcctaatgtagga
tgcagtgataaaatggaattgcgccaactggagaaacacttgtctcagtgtaagtttgcc
acagtgcagtgccctcagtgtctggaatctgttcgtaagagccatctggatgaacacaag
agcgagcagtgtatacagcggcttatgacctgccctgcctgtgcagggagctttgtgtat
gctaacaaacagattcatgaacagatttgtcctttcgccaatacagtgtgtgaatattgc
gaaatggagcttattcgggatcagttggcattgcactgtgacacagactgtctgaaagct
cctgtggcctgtactttcagaacttttggttgtcatgtaaagatgccaagaaatgaactg
gcccagcacatgcaggaatttacacagatgcacatgcgttgcatggctgagtttctgcgt
agccagactctcaatagctgctcagtgccctcatttgccacccactcttcgtcagatgaa
cgtggggcctctgcccgagccccagattcttgccagtgtagaccggagctgatgaacctg
cgtgagacggtcttggagctggagggccggctggttcgtcaagatcaacagatccgcgag
ctgtgcatccacaatgagacacagaaaaaccaggtcacagagctacgccgaaagctgagc
tcactggaggaggccacccgagagctggaagcccagcagtatcaaggcgtctacgtatgg
cgcttggagaacttctcacttcacctgcgcaaccaagaagccggtcagcccatagtcctc
cacagcccacctttctacacgggccggccggggtacaaactctgcctacgactgcatctg
caaactcccagcgccccacgctgttccaactacatctcacttttcgtgcacactatgcag
ggtgagtttgacagccagctctcctggcccttgcagggcatgatccaactggcagtgttg
gaccaggccgaggggcagcatcacgtggaagtgatggagaccaagccagacctgcaggcc
ttccagaggcccactgtccagcgcaaccccaagggtttcggctacgtcactttcctgcac
ctacaggctttgcggcagcgtgggtttgtgaaagaggacgtgctgttggtgcgctgcgag
gtcacaccacgattcgacgctagcctcaggagggaaggggtccaacctcgggggtcagaa
ccttcactttga
DBGET
integrated database retrieval system
