Sinocyclocheilus rhinocerous: 107730448
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Entry
107730448 CDS
T04916
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107730448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107730448
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
srx04054
]
107730448
Membrane trafficking [BR:
srx04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107730448
Pattern recognition receptors [BR:
srx04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107730448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
CARD
UPA-FIIND
NLRC4_HD2
NOD2_WH
AAA_25
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107730448
NCBI-ProteinID:
XP_016396780
LinkDB
All DBs
Position
Unknown
AA seq
1314 aa
AA seq
DB search
MMSSFEAQFVDRNYAALIQKVTSVMAITDELKNKGMLCDEKYSEIRAEQTSQGKMRMLFE
ALNSGGDGVKNDFYYALRNHEPHLFKDLGYFSWKHKPPVHDSKVATRHKSWSEMILKYKA
SVIDKCKFVIECNLPSVERVELTTRYTEPVIIQKSKKQDEKYYRKLVRFVHHFGQKTKPS
SQLLSNDKNHSIRIDQLFSPDSDGNTPKTVILSGDSGRGKSFMLQKIMLDWASGELYSEN
FDVVFLLKCEELKCISEEMNLFELLSWSCNLTSDQISQILELTPEKVLILIDGIDEFSFN
SHIQISSPTNPSQKALPMDTLRSLLNGLILPESFLLVITRSAADTEINLLKGPLRFTEIM
GFSERGVQEYFQKFFQDEQLFSKTYESLKANESLLTACSVPLLCWMVCFCLKKHLTDDDR
VMRELKSTTSIYVLFVSTLLEHHGHSQSVLSTLKSLVMLAEEGMKKQQVFLDEKCVTKTG
LDPATSVFLYKDSLKRNSRQVPVFRFMHLSFQEFFTALSYVLMDEEDSWLKIRKLLYRVD
LGEKIYRPSPERSNPIHPIILFLCGLSNEEVSSSLFEKIKWTVPHTIHLKQELYRSVIRR
TTFNEYNLLFDLHCLYELQDERFVSEALITQNLMDLSNISLRSTDCWVLLYCLQCCPHIR
DLNLMYCDLTAEKLKILQPALCVRESDLLSVEHLSEAGDLIQGLDESKVLSRLNAQEDKY
SAESPRWSLDLSVTHGVVLLSLSSSEKNPSFPAVLNISLTCPQSEIISTDWTLFLQRLGK
AGKVAEDSSALDEHVSLLLSSFHSVGLKTLHLDLVSLNESWASGIISLVQTCTSLQQLSV
GVTGLLLEEGLVLLKKSLTDPHCTVIIEGRKCSKPTDQCKEQDWSHSCNEKVKIHFKPKV
LEKLEELNISEPSGLNLHPLPVCQSCVHIGDSDQWVQVEPSVCTESDEGGSEFRISTPAG
RFECSRTRMRWVCAGDVTLQYRAVDGRFLRAELERLQCERIGPVIDVTVISGKLKEAHLP
HYACLAESDPSLKDDMKVLSVEEEGISLESVELTRFHAKILQPYFSAKTVLMKLGIAVKV
HCDLLIFMTHKDPIILHVYFFPIDSVFEEKIKKEKKLSHQIDLPRPETPLQMNKQHSLEV
PGAFVQPKKIKLKGDIKPNFFEVNLSVVDDINMTLSRVDDQKSVWTAKMCKALFGFMVTS
ESNLFQTGQKHKTPQVAVNFDKVQFFDRNWCDLIKSIKNVHAIADKLRHKQIIHEEFYTE
ITLPTSTSEANMRKICSIVRNGSDTVKKMFISIILEEDPDLLSHLPLPDSTFFA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagctttgaggcccagtttgtggatagaaactacgctgcgcttattcagaaa
gttacctcagtgatggcaataacagatgaactaaaaaataagggtatgctatgtgatgaa
aaatattcagagatcagagcagaacaaaccagccagggcaaaatgagaatgctgtttgaa
gcactaaattctggaggagacggagtgaaaaatgacttttattatgctctgagaaatcat
gaaccacacctcttcaaagacctgggttatttcagctggaaacacaagcctcctgttcat
gattccaaagtagcaaccagacataaaagttggagtgagatgattcttaagtataaagca
tcagtcattgataaatgcaagtttgtgatcgagtgtaatcttccatctgttgaacgtgtg
gaactgaccacccgttatactgaaccagtcatcattcagaagagcaaaaaacaagatgag
aaatactatcgtaaattggtgaggtttgtgcatcattttggacaaaaaacaaaaccatca
tctcaactgttatcaaatgacaagaatcacagcatcagaatagaccagctgttcagtccc
gacagtgatggaaacacaccgaaaactgtgattctcagtggagattctggaagagggaaa
tccttcatgttacagaagatcatgttggactgggcttctggagaactttactctgaaaac
tttgatgtagtttttctgttgaagtgtgaagagctgaagtgtatttctgaggagatgaac
ttgtttgaactcttgagctggagttgcaacttaacatcagatcagatctcacagatacta
gagctaacaccagagaaagtcctcatcctaattgatggaatagatgagttctcttttaat
tcacatattcagatatcatcacccactaatccatcgcagaaagccctaccaatggacact
cttaggagtctgctgaatggactgattctgcctgagtctttcctgctggttatcaccaga
tcagctgcagatacagaaattaatctcctcaagggacctctgcgtttcactgagattatg
ggcttctctgagagaggggtgcaggagtacttccagaagttctttcaggatgagcaactc
ttcagcaaaacatatgagagtctaaaagcgaatgaaagccttctgactgcctgctctgtg
cctttgctgtgttggatggtctgtttttgtctgaagaaacacttaaccgatgacgatcgt
gtgatgagagaactaaagtcaaccacctccatatatgtgctctttgtgtccactctacta
gagcatcatggtcacagtcagtctgtcctttccacgctgaagagtctggttatgctggca
gaggaagggatgaagaagcagcaggtctttcttgatgaaaagtgtgtaaccaagactggt
ttagatccagctactagtgtgttcttgtataaagatagtttgaaaagaaatagcagacag
gtgcctgtgtttaggtttatgcatttaagctttcaggagttcttcactgctctttcttat
gttttaatggatgaggaagattcctggttgaaaataagaaagctgctttacagggtggat
ttgggagaaaaaatctacaggccatcaccagaaagatcaaatcccatccatcccattatc
ctgtttctctgtggtctctcaaatgaggaggtgagcagctcactctttgaaaagatcaag
tggactgttcctcacaccatacatctgaagcaagaactgtatagaagtgttattagaagg
acaacatttaatgaatataacctgttatttgatctgcactgtctgtatgagctccaagat
gagagatttgtcagtgaagctctgattacacaaaacttgatggatctgtctaacatttcc
ctgaggagcacagactgttgggtgctgctgtactgtcttcagtgctgtccacacatcaga
gacctgaacctcatgtactgtgatttaacagctgagaaactcaagattcttcagccagca
ctctgtgttagagagtcggacttgttgtcagtggagcacctgtcagaagctggagatttg
atccagggtcttgatgaatcaaaagtcttgagcaggctgaacgctcaagaagataaatac
agtgctgagagtcccagatggtcacttgacctgtcagtcactcatggagttgtcttgttg
tctttgagctcctcagagaagaatccgtcatttccagcagtcttaaacatcagtcttaca
tgtccacaatcagagataatcagcactgactggacactcttcttacagagactcggcaag
gcaggaaaagtagcagaagactcttcagctcttgatgagcatgtcagtttgctgctgtct
tcatttcactctgtgggtttgaagacactgcatctggatttggtcagtctgaatgagagc
tgggcttctgggatcatttccctcgtccagacctgcacaagtctacagcagctcagtgtc
ggtgtcactggattgcttttggaggagggactcgtgttactgaagaaatcactgacagat
ccacactgcactgtgatcattgaagggaggaagtgcagtaaacccactgaccagtgcaaa
gaacaggactggagccacagctgtaacgagaaagtgaagattcacttcaaaccaaaggtt
ttggaaaagctggaagagctgaacatctctgaaccatctggactgaatcttcacccgctc
ccagtgtgtcagtcttgtgttcacattggtgattctgatcagtgggttcaggtggagccg
tcagtctgtacagaatcagatgaaggagggtcagagttcaggatcagcactccggcgggt
cgattcgagtgcagcaggaccagaatgcgatgggtctgtgctggtgacgtcactctccag
taccgtgcagtggatggacgtttcctcagagcagagctggagagacttcagtgtgagaga
attggacctgtgattgatgtgacagtgatctcagggaaactgaaggaggcccatctgcct
cattacgcctgtttagcagagtcagacccctctcttaaagatgatatgaaggtcctcagt
gttgaagaagagggaatatccttggaatcagtggagttgactcgttttcatgccaaaata
ctccaaccatatttttctgctaaaacagtgcttatgaaactagggatagcagtgaaagtg
cactgtgatctactgatcttcatgacacacaaagaccccatcatcctccatgtgtatttt
ttcccaatagattcagtttttgaagaaaaaattaaaaaagagaaaaaattgagccatcaa
atcgatcttccaagacctgaaaccccattacagatgaataaacaacacagtcttgaggtt
cctggtgcttttgtccaacccaaaaagatcaagctaaaaggagacatcaagccaaacttt
tttgaggtcaatctttcagtggtcgatgacatcaatatgactctcagccgagtggatgat
cagaaatcagtctggaccgcaaaaatgtgcaaagctttgtttggattcatggttacttct
gaatctaatttgtttcaaactggacaaaagcataagacaccacaagtagctgtcaacttt
gataaagttcagttttttgatagaaattggtgtgaccttattaaaagcattaagaatgtg
cacgccatcgcagacaaactgcgtcacaagcaaatcattcatgaagaattctatactgaa
atcactcttccgacttcaaccagtgaagccaacatgaggaagatctgtagcatagtgcgt
aatggtagtgacactgtaaaaaaaatgttcatctccattattctggaagaagatcccgac
cttttaagtcatctgcctttacctgactcaaccttttttgcttga
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