Sinocyclocheilus rhinocerous: 107737714
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Entry
107737714 CDS
T04916
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107737714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107737714
Membrane trafficking [BR:
srx04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
107737714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
ERM_helical
Motif
Other DBs
NCBI-GeneID:
107737714
NCBI-ProteinID:
XP_016404793
UniProt:
A0A673IH22
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MIGSPDVVALTKEDDFGDSFTDPCSLPEEFSVPLFAHAANANPWTKTSYAKFSKDFILVS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVADS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCLAYISADERKIMHQFQELSSEFSKASE
FLKSGNRKAFANELEKKLKDLEYTRSVLHKETELQKMNNGCYSTQAIEKANELANVEKSI
YEHKDLLRQITSYPSRKKDVDFVQHEMEKPADTSVIDDTLNSNHSDVADKTVETESESRK
SSYTPQLIKAKSAKCFDKRLKTMEELCDASFFHQTLEQLNIIEKSFRGDLCLIYTSQIDR
ALLSKQSVTSFLFEAERDWEYGGTSTNFSISSNNPTVPILNISGEPLSLDSYTTCIDVDH
IKPGVESMEGPPESSTSDITQETSEAADTETKGSFSSDKSIEAFGGVSPSSLQANYFDGL
ERKSKVSIASPSENTSCSVAVPQMTSDGNLVPMDAACCIGQDGFIFEEPLPELAQECCGD
TVVNQEPLSLLQGDPALQVDYTLEESALAESPNMGLTFSELNTEEVAKINIEDVSDSTSF
MSASTSSDQAVSPFTYGSALTLKQKKKAGHSALRFIRQYPFAQQAIFCLLSGRTLVILGV
DEGTVRKLVNALFIFVPNLGKYGETVQPWLSSPFQLTDLQRWKLIGLQRAASPAGSSILH
SLNRYSRYISILDCDNKTLRCPPYKGTLVSHLADHRTQIKRGSTYFLHVQGMLTQLTAKA
FLYTFCHHIHLPMDINDQGSVTSRRTNFLLQLGYTVEESKIVHYLSELIKQHYIQGSSKG
GNQSFCFNYTTSYLYKI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccagatgtggtggctttgaccaaagaagatgactttggggactctttc
acagatccatgctcacttccagaggagttttctgtgcctttgtttgctcatgctgccaat
gcaaatccctggacgaagacatcctatgcgaaattctcaaaagatttcatactcgtctct
gaattttcagaacaggtcggtccacagcctttactcaccattcccaatgatcccaaagtg
tgtgggacatttgaccttaactacttctcacttcgcatcatgtctgtggactaccaggcg
tcctttgttgggcatcctcctggcagtaactacccaaagctcaattttgtggcggattca
aaagttgtcctgggtgattccaaggaaggggcgttcgcttatgtccatcatctgacgctg
tacgacttggaggctcgtggatttgtgcgccccttttgcttggcctacatttccgcagac
gaaaggaagatcatgcatcagtttcaagaactgtcatccgagttttccaaggcttccgaa
tttttaaaatcaggcaacaggaaagcttttgcaaatgaactggaaaagaaactgaaagac
ctggagtacaccagatcggtgctgcacaaagaaactgagcttcagaaaatgaacaatggc
tgttattccacacaagctattgagaaggcgaatgaattagcaaatgtggagaagtccatc
tatgaacacaaagatctgctgaggcaaataacgtcttatccttccaggaaaaaagatgtt
gattttgtccaacacgagatggagaaaccggctgacacgagtgtaatagacgatacacta
aatagtaatcattctgacgttgcagataagaccgtggaaactgaaagcgagagtagaaag
tcctcttacacgcctcagctcataaaggccaaatctgcaaaatgctttgataaacgcttg
aaaacgatggaagagctctgcgatgccagctttttccaccaaactctagagcaactaaac
ataattgagaagtcattccgaggagatctatgccttatttacactagccagatcgacagg
gctcttctgagcaaacagagcgttactagtttcctcttcgaagctgaacgcgactgggag
tacggaggaacctcaacgaacttcagtatttcttccaacaatccaactgtccccattctg
aacatatctggcgagccgctgagtctcgactcgtacaccacctgcatagatgtagatcac
attaagccaggtgtggagtctatggaagggcctcccgagtccagtacatctgacattacg
caggaaacctcagaggccgccgacacggagaccaaaggaagttttagtagcgacaagagc
attgaggcttttggaggtgttagtccttccagtctacaggcaaattactttgatggtcta
gaacgaaagagcaaggtatccattgcatcaccatctgaaaacacatcctgctctgttgct
gtcccacaaatgacgtctgacgggaatctagtcccgatggatgcagcctgctgtattgga
caggacggtttcatttttgaggaacctttacctgagctcgctcaggagtgctgtggtgac
acagtggtgaaccaagaacctctgtctcttcttcagggagaccctgccttacaggtggac
tacactttagaagagtcagccctcgcagaaagcccaaacatgggactgactttttctgag
ctaaacactgaggaggtggcaaaaattaatatcgaagatgtctccgatagtacgagcttc
atgagcgcctccaccagttctgaccaagcggtgtctccgttcacctacggcagtgcgttg
acactaaagcagaagaagaaagctggtcacagtgctcttcgattcatcaggcaatatccg
tttgctcagcaagccattttctgccttctgagtggccgaacgctcgttattttaggggtg
gacgagggcacggtgaggaagctagtcaatgctttgttcattttcgttcccaatctcggc
aagtacggtgaaaccgtccaaccgtggctttcatcgccatttcagcttaccgacctgcag
agatggaaacttattggattgcagagagctgcctccccggctggatccagcattctccac
tctttgaatcgatacagccgttacataagcattttggactgtgacaacaagacccttcgg
tgtccgccatacaaaggaacactagtaagccatttggcagaccacaggactcagatcaaa
cgtggcagtacctacttcctccatgttcagggcatgttgactcagcttacagccaaggcc
ttcctatatacattctgccatcacattcaccttcccatggacatcaacgaccagggctcg
gtaacgtcgcgcaggactaatttcttgttgcagctcggctacactgtggaagagagtaaa
atcgtccactacctgagtgagctcatcaagcagcattacattcaggggtcctcgaagggg
ggcaaccagtctttttgttttaattacaccaccagctatttgtacaaaatctga
DBGET
integrated database retrieval system
