Sinocyclocheilus rhinocerous: 107742377
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Entry
107742377 CDS
T04916
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
srx04515
]
107742377
Cell adhesion molecules [BR:
srx04515
]
Cadherins
Protocadherins
107742377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
107742377
NCBI-ProteinID:
XP_016410814
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MDIRQRFVDGNISRIREMRQRIGGWRWAALWLFAFSLLWNTVGAQIRYTIPEELKEGSIV
GNIAKDLGFDVSDIAERKLRIASESNRQYFSVDSGKGDLVVNSRIDRETLCGQSASCLMP
LQIVIENPLQMHKVEIEIQDINDNAPNFHNKDGVLKISELTAPGVRFNLEIAEDLDVGSN
SLKSYSLSTNNFFRLNLKTVKNGRQIPELVLEKSLDREKQAVHKLILTALDGGNPVKSGT
SLLQIIVQDFNDNEPKFDVAVYKASVLESAVIGSSVIKIKATDLDEGLNSEIQYLLAAHT
PELVRNAFSVNAETGEITVIGKLDYEATTSYTFDVCAKDKGNPELEGQSSVQIDIIDEND
NPPEIILTSLPSPVPENSTVGTVVALITVKDLDSGNNGKVELIVSPDLPFKLKPTFDSHY
SLITDSLLDCEVHSEYNVEILAMDFGVPPLKTVKTVNVKVLDVNDNQPIFSQSSYNVYIN
ENNLAGVSLFSVSAVDTDQDKNALLTYSVLDLSSNQVPASSYFYINSENGTIYSMSSFDY
EKMKLISIVVQSRDHGSPSLSSNATVHVFILDRNDNAPVIIYPSTSMGSVTHQRMPRSAK
AGHLVTKVTAVDADSGHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEHDDSSQRLV
IEIKDNGEPIQSTTVTVDILIEDGFHEPISDYREKIIEPNKKSSKITLYLIISLASVSLF
CLLTFFILLVKCARGSRRGSSCCIRRTNSEYKNPNRNLQIQLNTDGPIKYVEVLGGDMMS
QSQSFGSYLSPMSEFSDLTLVKPSSTTNFTDTLNVLDASLPDSAWTFESQQVRKPRCKKL
MCIHTLYYLYLTVIE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggatataagacaaagatttgttgacgggaatatcagccgcattagagaaatgaggcag
aggatcggagggtggagatgggcagcgctttggctgttcgctttctctctattgtggaat
acagttggagctcagattcgctacacgatacccgaagagttaaaggaaggatctatcgtt
gggaacatcgcgaaggatcttggttttgacgtctcagatattgccgagcgtaagttacga
atagcatctgagtcgaataggcaatattttagtgtggattcagggaagggtgatctggta
gttaatagcagaatagacagagagacgctctgtggacaaagcgccagttgcctaatgcca
ctgcagatcgttattgagaatccattacagatgcataaggtagaaatagaaatacaggat
attaatgacaatgcaccgaacttccataataaagatggagtattaaaaatttcagaattg
actgctccaggcgtgcgatttaaccttgaaattgctgaggacctcgatgttggcagcaat
agcttaaagtcatattcattgagcactaacaatttcttccggctaaatttaaagacagtt
aaaaatggaaggcagataccagagctagtgcttgagaaatcactagacagagaaaaacag
gcagttcacaagctaatattaacagctctagatggtggtaatccggtaaaatcgggcaca
tcgttattgcaaataattgttcaagacttcaatgacaacgaaccaaagtttgatgtagct
gtatacaaagcatctgttttagaaagcgctgttattggttcaagtgtaatcaaaataaaa
gcgaccgatttagatgaaggtctaaatagtgaaatacaatatttattggctgcgcacacg
cctgaattggtaagaaatgcttttagtgtgaacgctgaaaccggcgaaataacagtaatt
ggaaagctagattacgaggccaccacatcatatacgtttgatgtttgtgctaaagacaaa
gggaatccagagctcgaagggcagtcatcggttcagatagatatcatagatgagaatgac
aatcctccagagattatcctgacgtccttaccgagtcctgttcctgaaaattcaacggtg
ggaactgtggtggctctgattaccgtcaaagatttggactccggtaataatgggaaagtt
gagctaattgtctccccggatcttccctttaaattaaagccaactttcgatagccattat
tcactgataactgactcattattagattgtgaggttcattccgaatataatgtagaaata
ctggccatggactttggtgttccacccttaaaaactgtgaagactgtaaatgtaaaagtg
cttgatgtaaatgacaaccaaccaatattctcacagtcttcatataatgtttacataaac
gaaaataatctggcaggcgtttcattgttttctgtatctgcagttgatactgaccaagac
aaaaatgctcttctcacttactcagttctggatttaagttctaatcaagttccagcatca
tcctatttttatataaactctgagaacggaactatttacagcatgagctcatttgattat
gagaaaatgaagctaatcagcattgtagtgcagtctagagatcatggctctccatctttg
agcagcaacgccacagttcatgtgttcattctggaccggaacgataacgcacctgttatc
atctacccgtccacatccatggggtctgttactcatcagaggatgcctcgttctgctaaa
gcaggacatctcgttactaaggtgacagcagtggacgcggactcgggtcataacgcctgg
ctgttctacaggctcgcggaggccacggacgcgtctctgttcagtgtcaatttacatacg
ggagaggtgagaactaaacgcgctgtttcagagcacgatgactcctcgcagagactggtg
atagaaataaaggataatggagagccgatccagtccacaactgtcacagtggatatactg
atagaggacggctttcatgagcccatctcagactacagagagaaaattatcgaacccaac
aagaaaagcagcaaaattacattatatctgatcatctctttggcttctgtatccttgttt
tgtctgttgacgtttttcatcttactggtgaaatgtgcgcgaggcagtagacgcggctca
agctgctgtatcaggagaacaaattctgaatacaagaaccccaacagaaacctgcagatc
cagctcaacactgacgggcccattaagtatgtggaggttctgggaggagacatgatgtct
cagagtcagtcctttggctcctatctctctccaatgtcagaattcagtgatctcaccctc
gttaaacccagcagcaccacaaactttacagacacgctaaacgtgcttgatgcgtcatta
ccagacagcgcgtggacgttcgagagccaacaggtgagaaagcctagatgtaaaaagtta
atgtgtatacatacactatattatttatacttaacagtgatagaatga
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