Sinocyclocheilus rhinocerous: 107743901 Help Entry 107743901         CDS       T04916                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04115   p53 signaling pathway srx04145   Phagosome srx04148   Efferocytosis srx04350   TGF-beta signaling pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107743901   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107743901  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107743901    04148 Efferocytosis     107743901   09143 Cell growth and death    04115 p53 signaling pathway     107743901   09144 Cellular community - eukaryotes    04510 Focal adhesion     107743901   09142 Cell motility    04820 Cytoskeleton in muscle cells     107743901  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107743901   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107743901 Membrane trafficking [BR:srx04131]  Endocytosis   Phagocytosis    Opsonins     107743901 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107743901 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C TSP1_ADAMTS EGF_3 cEGF EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  107743901 NCBI-ProteinID:  XP_016412836 UniProt:  A0A673MRP9 LinkDB All DBs Position Unknown AA seq 1174 aa AA seqDB search MTLRGLVLCLLLWSSASSRRVEMPDDDTVFDLFELTHVHKKHHGVSLVKGPDPNSPAYKI LNPNLIPSEPELSFRDLIYSIQSERGCIFTANLKQAKCTRGSLVSVERTDGTGSVFEIIS NGKANTVDLVYWNASGQHVVSIEDVNLANGHWKNITVFVQEDRAQVHVGCEEINTQELDA PIQQILNQESADISSLRFAKGAAKSDRFMGVLQNVRFVFGTTLDAILRNKGCESSTFITD VMTLENPVNGSSPAIRTDYTGHKSKDLQDICGFPCDDLSSMFKELKGLGLVVKQLSNELR QVTADNNLIMTQIKIHEGVCLHNGIVYRDKDEWTVDSCAHCTCQNSATVCREISCPLMPC ANATVPDGECCPRCGTPNDAGVDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCDGTS VQTRDCYTQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCEGD GRQTEPCQKDPCPVNGGWGPWSSWDSCSVTCGGGLQRRHHLCNSPAPKYGGKECMGDSKG TRLCNAQSCPVDGCLSNPCFAGTKCTSFPDGSWKCGECPVGYTGDGVHCQDIDECEEVLD ACFVLNGVHQCVNTEPGYNCLPCPPRYSGQQPFGRGTEQAIANKQVCTPRNPCEDGSHDC NKNANCIYLGIFSDIMYRCECKPGYAGNGYICGEDSDLDGWPNTDLHCVENATYHCKKDN CPDLPNSGQEDYDKDGTGDACDNDDDNDGIPDDGDNCPFIFNPRQYDHDRDQVGDRCDNC PYDSNPEQTDTDNNGEGDACAIDIDGDGILNEKDNCPYMYNTDQRDSDGDGVGDHCDNCP LEHNPDQIDSDSDNIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQVDHDKDGKGDACDHD DDNDGVPDDKDNCRLAFNPDQLDLDGDGRGDVCKDDFDVDNVPDIYDVCPENFGISETDF RRFQMVPLDPTGTSQIDPNWVVRHQGKELLQTVNCDPGIAVGYDEFNAVDFSGTFFINTD RDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTKAQGYSGLSIKVVNSTTGPGEHLR NALWHTGDTEGQVRTLWHDPKSIGWKDYTAYRWQLIHRPKTGHIRVIMYEGKKVLADSGS INDKTYAGGRLGLFVFSQEVVYFSDLKYECRDAS NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt atgactctgagaggactcgttttgtgcctcttgttgtggagttccgcgagcagcagacgc gtagaaatgccggatgatgataccgtgttcgacctgttcgagctcactcatgttcataag aagcatcacggggtgagtttagtgaagggacccgatccaaacagccccgcgtacaagatc ctgaacccgaacctgatcccctcagagcccgagctctccttcagggacctgatctactcc attcagagcgagagaggctgcatcttcaccgccaaccttaagcaagccaagtgcaccaga ggcagcctggtctccgtggagaggacagacggcaccggatccgtctttgagatcatctcc aacgggaaagccaacaccgtggatctggtgtactggaacgcgagcggacagcatgtggtg tccattgaggacgtgaacttggcgaacggacactggaagaacatcacggtgtttgtgcag gaggatcgagctcaggtccatgtgggctgcgaggagatcaacactcaagaactcgatgct ccgatccagcagatcctgaatcaggagagcgcggacatctcgagcctgaggttcgccaaa ggagccgccaaatccgatcgcttcatgggagttctccagaacgtgcggtttgtttttgga acgacgctggacgcgattttacgcaataaaggatgcgagagctcaaccttcatcactgat gtcatgaccttggaaaaccccgtgaacggatccagcccggccatccgcactgattacacc ggacacaagtctaaagatctgcaggacatctgtggattcccatgcgacgatctgtcgagc atgtttaaggagctcaagggactgggcctggtggtgaagcagttgtcaaacgagctccgc caagtgacagcagacaacaacttaatcatgactcagattaaaatccacgaaggggtttgt ctgcacaatggcatcgtttacagagacaaagacgagtggacggtggacagctgcgcccac tgcacgtgtcagaactccgccactgtgtgccgtgaaatctcctgtcctctcatgccctgt gccaacgctactgtcccagacggtgaatgctgcccacgctgtggaacaccgaacgatgcg ggtgtggacggctggtcgccctggtccgaatggacacactgttcggtgacctgtggaaga ggcattcagcagcgcggacgctcttgcgaccgaatcaatagcaactgcgacggcacgtct gtccagacgagagactgttacacgcaagaatgcgacaaacgcttcaagcaggatggtggc tggagccactggtctccctggtcttcttgctcagtgacgtgtggagagggcgtcatcact cgcatccggttgtgcaactcccctacgcctcagatgggtgggaaagactgcgagggagac ggtcgtcagaccgagccgtgccagaaggacccgtgccccgtgaatggaggttggggaccc tggtcatcatgggactcttgctccgtcacgtgcggtggaggactgcagcgcagacaccat ctgtgtaacagccccgctcccaaatacggtggaaaagaatgtatgggtgactccaaaggc acccgtttgtgcaatgcccagtcgtgtccagttgatggatgcctgtctaacccgtgcttt gccggcaccaaatgcaccagcttccccgatggctcctggaagtgcggcgagtgtccggtt ggatacactggggatggagtccactgtcaagacattgatgagtgcgaagaagttctagat gcttgtttcgtgctcaatggagtccatcagtgtgtgaacacagaaccaggctacaactgc ctgccctgccctccacgctactctggacagcagcccttcggcaggggaacggagcaggcc attgccaacaaacaggtctgcacacctagaaacccatgcgaggacggcagccatgactgc aataagaatgccaactgcatctacctgggcatcttctctgacatcatgtaccgctgcgaa tgtaaaccaggctacgctggaaatggttacatctgtggagaggactctgaccttgacggc tggccaaacacggacctccactgtgtggaaaacgccacctaccactgcaagaaggacaac tgtcctgaccttcccaactctggtcaagaagactatgacaaagatggaactggagatgct tgtgacaatgatgatgacaatgatgggatccctgatgatggggacaattgcccgttcata tttaacccaagacagtacgaccatgaccgcgatcaagttggtgaccgatgtgataattgc ccatatgacagtaatccagaacagaccgacaccgacaacaacggcgagggtgatgcgtgt gccattgacatcgatggtgatggcatcctgaatgagaaagacaactgtccatatatgtac aacactgaccagagagacagtgacggagacggagtcggtgaccactgtgacaactgccca ctggagcacaaccctgaccagatcgactctgactctgacaacattggagacaagtgtgac aacaaccaggacatcgatgaggatggacatcagaacaaccttgacaactgtccctacatc cccaacgccaaccaggtcgaccatgacaaggacggcaaaggagacgcctgcgatcacgac gacgacaatgatggtgtgcctgacgacaaagacaactgccgactcgccttcaacccagat caactagatttggacggagacgggcgaggtgacgtttgcaaggacgactttgacgtcgat aacgtgccggatatttacgacgtttgcccggagaactttggcatcagtgaaacagacttc cgtaggttccaaatggttcctctcgatcccactggaacttcccaaatcgaccccaactgg gtcgtccgtcaccagggcaaagaacttctgcagaccgtcaactgtgatcctggcatcgct gttggttatgatgagttcaatgccgtggactttagcggcacgttcttcatcaacacagac cgtgatgacgactacgccggctttgtgtttggctaccaatccagctcacgtttctacgtg gtgatgtggaaacagatcacacagacctactggtctcatacacccactaaagcacagggg tactctggactgtccattaaagtagtgaactcgaccacaggaccgggcgaacatctcagg aacgctttgtggcacactggagacaccgagggacaggtgcgtaccctgtggcatgatccc aagagcattggctggaaggattacaccgcctacagatggcaactaatccacagacccaaa accggacacatcagagttatcatgtatgaaggcaaaaaagtcttggctgattcaggaagc atcaatgacaagacatatgccggaggaagacttggcctctttgtcttctctcaagaggtg gtttacttctcagacctcaaatacgaatgccgagatgcatcataa

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