Sinocyclocheilus rhinocerous: 107749210
Help
Entry
107749210 CDS
T04916
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107749210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107749210
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
srx04054
]
107749210
Membrane trafficking [BR:
srx04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107749210
Pattern recognition receptors [BR:
srx04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107749210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD
FIIND
UPA-FIIND
NACHT
NLRC4_HD2
SHOCT_2
NOD2_WH
YbjQ_3
Motif
Other DBs
NCBI-GeneID:
107749210
NCBI-ProteinID:
XP_016419792
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MFYRLDAMSDHEARYVDTHRAELIQSVQRVMVVTRNLLSEGRINVETYSQIRRAGTKQDR
MRKLYEALDEGGAEIKSAFYAALRKCEPDLTFLGYSFEPACIALRIDPFLKQAQFVDRNR
SELIQRVTMVMPVMDELLAQHELNDQTYTRIRRAPTNREQMTELYTALDEGGNKVKSAFY
FALRKHEPHLLCYLVPVKCLSQKMSLIQLLSWSYSITYQISQILELTPDKVLILIDGIDE
FSFDPHIQISSPTKSSQQALPMDILRSLLNGQILPESFLLVTTRSDAGTVMNLLKGPQPA
TEIVGFSERGVQEYFQKFFQDEQLFRKTYESLKTNESLLTACSVPLLCWMVCFCLKKHYT
DDDHVMRELKTTTSIYVQFVSTLLEHHDQSQSVLRSLGQLAEEGILDEEVFFDKKAVFKT
GLDAESSLFLHESDIQDLRKRALKFMHLSFQEFFMALYYMFLNEEESQRNIRDILTAERV
KGRLTNSIASVLLFLCGLSNEDSSNSLFEKHNWTVPYIIRKEMESTILTLQDEDKLFALQ
CLYELQDEEFVRRALGDWVSLDLSNISLRSTDCWVLLYCLQCCPHIRYLNLMYCDLTAEK
LKILQPALCMCETLRLSVDHLPEFGDLIKTLCEFKSLKELKVQEDEYSGESPRWSLDLSV
AQEDYLLSLSTSEKNPSFPTVLNISLTCPQSEISSTDWSLFLQKLSKAGQFAEDSSALDE
FVSLLLSSFYFGGLKKLNLKVASFNESWASGIISLVQTCTSLQQLSIEEYSDNPRSLFSR
FIVLVYNEDIRLDIRHRRNTESLSKISLTFPRSALSSSDWKILFQRFHEVSRYQQNSPEC
NEQADALFTFLHSVCDLKSVELIIFSLNQSWALRILALIQACSSLQEICVRATGLLPEVG
LELLYESLTDSHCSVIIEGPTISDSEQSRLNLQPLPVCQSCVHIVDSDQWVQVEPSVCTD
EGGSEFRISTPAGRFECSRTRMRWVCAGDVTLQYRAVDGRSLRADLERLQCERIGPVIDV
TVISGKLEEAHLPHYACLAELDCSFTESVKVLNVEDDGLTFESVELTRFHAKILQPYFSP
KTVLMKLGIPVKVHCDLLIFMTHKNPIILHVYFFPSDLIFKEKIKVEEKSSQPIKCPRPE
TPLRMMKQHSLEVPGASVQPEEIKLRGDIDPNFFKVKHPVVDDIKMSLSRVDDPKSVWTA
TIWKEELDKTITSKDASSLFQHGEMQTKPQVSVNFDKVRFFDRNWCALIKSVKNVNAIAD
KLLQEKVINEEMYSKITHLTSTKEESMREICSKVRKNSVSVKNLFISVIQEEEPSLLNQG
CPSLFLEDHYPAEVSSNPN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgttctataggctggacgcgatgtcagatcacgaggcccgatatgtagacacgcacagg
gctgagctcatccagagcgtccagagagtgatggtggtgacacgcaatctgctgtcagag
ggcaggatcaatgtggagacatattcacagatcaggagagctgggaccaaacaggacaga
atgagaaagctttatgaagcactggatgaaggaggagctgaaattaaatctgcgttttac
gctgcactgaggaagtgtgaaccagaccttactttcctgggttattcgtttgaaccagct
tgtattgctcttcgaattgatccattcctgaaacaagcccagtttgtagataggaacagg
tctgagctcatccagagagttacaatggtgatgccagtgatggatgagctgctggcacaa
cacgagctcaatgatcagacatatacacggattaggagagcaccaaccaaccgtgagcaa
atgacagagctttataccgcactggatgaaggagggaataaagtgaaatctgccttttat
tttgctctgaggaagcatgaaccacacctgctctgttacctggtacctgtgaagtgtctt
tcccagaagatgagtttgattcagctcttgagctggagttacagcataacatatcagatc
tcacagatactagagttaacaccagataaagtcctcatcctcattgatggaattgatgag
ttctcattcgatccacatattcaaatatcatcacccactaaatcatcgcagcaagctcta
ccaatggacattctcaggagtctgctgaatggacagatcctgcctgagtctttcctgctg
gttaccaccagatcagatgctggtacagtgatgaatctcctcaagggtcctcagccagcc
actgagattgtgggcttctctgagagaggggtgcaggagtacttccagaagttctttcag
gatgagcagctcttcaggaaaacatatgagagtctgaagacaaatgaaagcctcctgact
gcctgctctgtgcctttgctgtgttggatggtctgtttttgtctgaagaaacactataca
gatgatgatcatgtgatgagagaactaaagacaaccacctccatttatgtgcagtttgtg
tccactctattggagcatcatgatcagagtcagtctgtcctcaggagtctgggtcagctg
gcagaggaagggatactggatgaagaagtcttctttgacaagaaggccgtgttcaagaca
ggtttagatgctgaaagtagcctgttcctgcatgaatctgatattcaagatttaaggaaa
agagcactcaagtttatgcacctcagctttcaggagttcttcatggctctttattatatg
tttctgaatgaagaagagtcccagaggaacatcagagacatcttaactgctgagagagtg
aaaggtagactaacaaattccatcgcttcagtgcttctgtttctctgtggtctctctaat
gaagactcaagcaactcactctttgaaaagcacaactggactgttccttacatcataaga
aaagaaatggagagcacaatccttacacttcaggatgaagataaactatttgctctccag
tgtctgtatgagctccaggatgaggagtttgtgaggagagctttaggagattgggtatcc
ctggatctgtctaacatttctctgaggagcacagactgctgggtgctgctgtactgtctt
cagtgctgtccacacatcagatacctgaacctcatgtactgtgatttaacagctgagaaa
ctcaagattcttcagccagcactctgtatgtgtgagactctgaggttgtcagtggaccat
ctgcctgaatttggagatttgatcaagactctctgtgaattcaaatcattgaaggaactg
aaagttcaggaggatgaatacagtggtgagagtcccaggtggtcacttgacctgtctgtt
gcacaggaagattacctgttgtctttgagcacctcagagaagaatccatcatttccaaca
gtcttaaacatcagtcttacgtgtccacaatcagagatatccagcactgactggtcactc
ttcttgcagaaacttagcaaggcaggacaatttgctgaagactcttcagctcttgatgag
tttgtcagtttgctgctgtcttcattttactttggcggtctgaaaaagttgaatctgaag
gtggccagctttaatgagagctgggcttctgggataatttctcttgtccagacctgcacc
agtctacagcagctcagtattgaggaatacagcgacaatcctagaagtctcttctcaagg
ttcattgtattagtttacaatgaagacatcaggttggatataaggcatagacggaacact
gaatctctctcaaaaatctctcttacttttccacgctcagcgttaagcagctctgactgg
aaaatcctcttccagagatttcatgaagtgtctagataccaacaaaattctccagagtgt
aatgagcaagcggatgctctgtttactttcctgcactctgtgtgtgatctgaagagtgtg
gagctgatcatcttcagtctgaatcagagctgggctctcaggattctcgctctcatccag
gcctgcagcagtctgcaagaaatctgtgtccgtgccactggtttgctgccggaggtggga
ctcgagttactgtatgaatcactgacagattcacactgctctgtgatcattgaagggcca
accatctctgactctgaacagtctagactgaatcttcagccgctcccagtgtgtcagtct
tgtgttcacattgttgactctgatcagtgggttcaggtggagccatcagtctgtacagat
gaaggaggctcagagttcaggatcagcactccggcgggtcgattcgagtgcagcaggacc
agaatgcgatgggtctgtgctggtgacgtcactctccagtaccgtgcagtggatggacgt
tccctcagagcagatctggagagacttcagtgtgagcgaattggtcctgtgattgatgtg
acggtgatctcagggaaactggaggaggcccatctgcctcattacgcctgtttagcagag
ttggactgctctttcacagaaagtgtaaaggtcctcaatgttgaagatgatggattaacc
tttgaatcagtggagttgacacgttttcatgccaaaatactccagccatatttttctcct
aaaacagttcttatgaaactagggataccagtgaaagtgcactgtgatctacttatcttc
atgacacacaagaaccccatcattctccatgtgtattttttcccatcagatttaattttt
aaagaaaaaattaaggttgaggaaaaatctagtcaaccaatcaaatgtccaagacctgaa
accccactgcggatgatgaaacaacacagtcttgaggttcctggtgcttctgtccaaccc
gaagagatcaaattaagaggagacatcgatccaaacttctttaaggtcaaacatcctgtg
gtcgatgacatcaaaatgtctctcagccgagtggatgatccgaaatcagtttggactgca
acaatttggaaagaagaactagacaaaacaattacaagcaaagatgcgtctagtttgttc
caacatggagaaatgcaaacaaaaccacaggtgtctgtcaactttgataaagttaggttt
tttgatagaaattggtgtgctcttattaaaagtgttaagaatgtgaacgccattgcagac
aaactgcttcaggagaaggtcattaatgaagaaatgtattctaaaatcacacatctgact
tcaactaaggaagaaagcatgagagagatctgcagcaaagtacgtaaaaacagtgtcagt
gtgaaaaatctcttcatctctgttattcaggaagaggagcccagtcttttaaatcagggg
tgtccaagcctgttcctggaggaccactatcctgcagaggttagctccaaccctaattaa
DBGET
integrated database retrieval system
