Sinocyclocheilus rhinocerous: 107752720
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Entry
107752720 CDS
T04916
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107752720
Membrane trafficking [BR:
srx04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107752720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
Ferlin_C
FerI
UTRA
Motif
Other DBs
NCBI-GeneID:
107752720
NCBI-ProteinID:
XP_016424232
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MRMPDPDTISLASVTAVTTNVSNKRSKPDIKIEPSAGRPVDFQVSVTVIEARQLVGLNMD
PVVCVEIGDDKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKILKVSVIHSKNLLRSGT
LVGSFKLDVGTVYTQPEHQFFHKWATLCDPDDITAGCKGYVKCDIAVVAKGDTIKTPHKT
NETDEDDIEGNLLLPEDVPAERQWARYYVKIYRAEGLPKMNTSIMANVKKAFIGENKDLV
DPYVQVQFAGQKGKTSIQKSSYEPIWNEQIVFTEQFPPLCRRMKVQIRDSDKVNDVAIGT
HFIDLRKIANDGDKGFLPTLGPAWSNMYGSTRSYTLMDEYQDLNEGVGEGVSFRARLLIS
LAVEILDTSSPEVMSSTEVQVEGIPNISDNATGKIEEFFLFGCFLEATMIDRKIGDKPIN
FEVTIGNYGSEVDTPTKPKTKKKKGGDGDEESELIYGSSDEEVDDGGDMTSVSTSPPMKP
VITDRNYFHLPYFERKPCIYIKSWWQDQRRRLYNANIMDRIADKLEEGLNDVQEIIKTEK
AYPERRLRGVLEELSSGCSTFVTLANNDQNQAGKTKLDRERLKLCMQELENMGQQAKNMR
SQVKKSNVKDKIKLAQNFLHKLRFLSDEPQHSVPDIYIWMISNNKRIAYARVPSKDILFS
SVDEETGKDCGKVQTIFFKLPGKKSFGPAGWTVQAKTELYLWLGLNRQRKDYLSGLPNGF
EENKAVKGPGMSSPPISLMYTMKQIFQLRVHMYQARSLFAADSTGLSDPFARVFFSTHSQ
VTEILNETLCPTWDQLLVFDNVELYGEAGELRDDPPIIVIEIYDQDTVGKADFMGRTFAK
PITKMSDEHYGPPRFPPQLEYYQIYRGNGTAGEMLAAFELLQIGPAGKADLPPIDGPSDI
DRGPILPVPIGIRPVLSKYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQN
YKKNPNFSTLMKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSNAVTTLRKFIYRPS
DKSVNNWSAMGRLLQMYKHRCXMLLHDXHSFFSTEEVVIHTEPEPAVKKTETVVKLDSAS
DAVVKVDMPDDEKGEKGKKKRKKGEEVEEEELDESMLDWWSKYFASIETLKEIIKAQEAD
AEEKEDFDSGEGLPNMLLNASDMKGTKKRRGKGNKNKAMPGQGVPEKKKHKMEELKMYSR
ELEYEFNTFEDWLHTFNLYRGKCSDDADVEQNAADEDRLIGKFKGSLCIYKVPASDDVSR
EMGLDSNMGMFQNIPHNDPINVLVRVYVVRATELHPADINGKADPYIAIKLGKTEIKDKE
NYISKQLNPLFGKSFDIEATLPMDSTLTVSIYDWDLVGTDDLIGETKIDLENRFYSKHRP
TCGLSTSYAIHGYNVWRDPMKPTQILAKLCKDGKMDPPQYGPGGRVKVVNRVYTGPTEIE
DENGLKKQTDEHLALAVLNRWEDMPRIGCKLVPEHVETRPLLNPDKPGMEQGRIELWVDM
FPKDMPAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQ
EDKQDTDVHYHSLTGEGNFNWRFVYPFDYLQAEEKIVISKKESMFSWDETEYKIPARLNL
QVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSIDMVLNEQDMPMVNIFKQKRIKGWW
PFVARDENDELEITGKVEAELHLLTGEEAEKSPVGEGRNRSHIPFRPDTTFLWFISPLKA
IRYLICNNYKWLIIKIVVVLLLLVMLGLFLYSMPGYMVKKLLGA
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgccagacccggacaccatctcactcgcatcagtcactgctgtcacaaccaat
gtctccaataagagatcaaagcctgacatcaagattgagcctagtgctggaagaccagtg
gatttccaagtcagtgtcactgttatagaggccagacagctggtgggtctgaacatggat
ccagtggtgtgtgtagaaatcggtgatgacaaaaaatacacctcaatgaaggagtcgacc
aactgcccttactacaatgagtactttgtttttgacttccacgttcctcctgatgtcatg
tttgacaagatcctgaaagtgtctgttatccactctaagaatcttttgcgaagtggcacg
ctggtcgggagcttcaagcttgacgtgggcacagtttatacacaacctgaacatcagttc
ttccacaaatgggccactttatgtgaccccgatgatatcactgctggatgcaaaggctat
gtcaagtgtgacatcgcagttgtggcaaagggcgacactatcaaaactccacacaaaaca
aatgaaacagacgaggatgacattgagggtaatcttctgttgccggaagacgtcccggct
gagcgtcaatgggcaagatactatgtgaaaatctaccgagccgaggggttgcccaaaatg
aacaccagcataatggcaaatgtcaaaaaagctttcattggagaaaataaggacttagtt
gatccgtatgtccaagtgcaatttgcagggcagaagggtaaaacttcaattcagaagagc
agctatgagccgatttggaatgagcagatcgttttcactgagcagtttccaccactgtgc
cggagaatgaaagtccagatccgtgattcggataaagtgaacgatgtggccatcggaacg
cacttcattgacctgcggaagattgctaatgatggagacaaaggctttcttccaactctt
gggccggcttggtccaacatgtacggctccacacgcagctacacactcatggacgagtac
caggacctgaatgaaggagtaggggaaggggtgtctttcagggcccggctgctgatcagt
ctggccgtggagatactggacacctcctctcctgaagtaatgagctccactgaggtgcaa
gtggaggggatacccaacatctcagataatgccacgggaaaaattgaagagttctttctc
tttggatgtttccttgaagccactatgattgacaggaagattggagacaaacccatcaac
tttgaggttacaataggaaactacggcagtgaagtcgataccccaaccaagccaaaaaca
aagaagaagaagggtggcgatggagatgaggagtctgagctcatttacggctccagtgac
gaggaggtggatgatggtggagatatgacatcagtttccacctctcctccaatgaagcca
gtcatcactgacagaaactatttccacctcccgtactttgagaggaagccctgcatctat
atcaagagctggtggcaggaccaaagaagacgactttataatgctaacatcatggacaga
attgcagataaattggaagaagggttgaatgatgtgcaggagatcattaaaacagagaaa
gcctatcctgagcgcagactaagaggagtcctggaggaactcagcagtggctgcagtacc
tttgtaactttggcaaacaatgatcagaatcaggctgggaagactaaactggaccgggag
agactgaaattatgcatgcaggaattggaaaacatgggccagcaagcaaagaatatgcga
tcccaagtaaagaaaagcaatgtgaaagacaaaataaaacttgcacaaaacttcctccac
aagctgagattcttgtctgatgagcctcagcatagtgttccagatatttacatatggatg
ataagcaacaacaaacgtattgcatatgcccgtgttccctccaaagacatcctcttctct
tctgtggacgaagaaaccggaaaggactgtgggaaagtccagaccatctttttcaagctc
cctggtaagaaaagctttggacctgcaggctggaccgttcaggctaaaactgagctgtat
ctgtggctcggcttgaacaggcagcgtaaggactacttgagcggcctgccaaatgggttt
gaggagaacaaggcagtaaaagggcctggcatgtcttcaccccctataagcctgatgtac
acaatgaagcagatcttccagctgagggttcacatgtatcaggctcgcagtctgtttgcg
gctgacagcacaggcctgtcagacccttttgccagggtatttttttccacccacagccag
gtcacagagatcctgaatgagacgttgtgtcctacatgggatcagctgctggtgtttgat
aatgtggagctctatggtgaggctggtgaactgagagatgatcctcctataatcgtcatc
gagatctatgatcaggacactgtcggaaaagccgatttcatgggtaggacattcgcaaaa
cctataaccaagatgtcagacgagcattatgggccgccacgcttccctcctcaactagag
tactaccagatctaccggggaaacggcactgcaggagaaatgctggcggcctttgagctg
ctgcagattggaccagctggaaaggccgacctgcccccaatagatggaccttccgatatc
gatcgtggtccgatcctgccggttcctattggcataagacctgtcttgagtaaataccga
attgaggttcttttctggggcctgagggacctgaagcgagtgaatctggctcaagttgac
cgcccccgtgtggacatcgagtgtgcagggaaaggtgttcagtcagcgctgattcagaac
tacaagaaaaaccccaacttcagcactctgatgaagtggtttgaagtggacctgccagag
aacgagctcctccatcctcctctgaacatccgcgtggtggactgccgggcgtttggtcgt
tacacactagttggctctaatgccgtcacaactctacgcaagttcatttacaggccatcg
gacaagagtgtcaataactggtctgccatgggtcgtttgctccagatgtataaacacaga
tgctaaatgctgctgcacgactaacatagttttttctctacagaggaggttgtgatccac
acagagccagaaccagctgtgaagaagaccgagacagtggtcaaactcgactcagcgtct
gatgctgtggttaaggtcgatatgccagatgatgagaaaggtgagaaagggaaaaagaag
cggaagaagggtgaagaggtggaagaggaggagctggacgaaagcatgctggactggtgg
tccaaatactttgcctcgattgaaacgctgaaagagatcattaaagcgcaagaggcagac
gctgaagaaaaggaagactttgactctggagagggattaccaaatatgctcctaaatgcc
tctgatatgaaagggaccaagaaaaggagaggaaaaggaaacaagaacaaagccatgcct
gggcaaggagtaccagagaagaagaagcacaaaatggaagagctgaagatgtacagcaga
gagcttgaatatgagtttaacacctttgaagattggcttcacacttttaacctttatcga
ggcaagtgttcagatgatgctgacgtcgagcagaatgcagctgatgaagacagacttatt
ggcaaattcaagggatccctgtgcatctacaaagtcccagcatcggatgacgtgtccaga
gaaatgggcttagattctaacatgggcatgttccagaacatcccacacaacgaccccatt
aacgtcctcgtccgagtctatgtggtccgggcaacagaactgcatcctgcggacatcaat
gggaaggccgacccatatatcgccatcaagctcgggaagacagagatcaaggacaaagag
aactacatctctaaacaactcaaccctttgtttggaaagtcttttgatattgaagcgacg
ctcccaatggattccaccctcaccgtgtccatctacgactgggatttggtgggaaccgat
gacctgattggggagacaaagattgacttggagaaccgtttctacagcaagcacaggcca
acctgtggtctcagcaccagctacgcaattcatggctataatgtgtggagggacccaatg
aagccaacgcagatccttgccaaactctgcaaagatggaaaaatggatccgccccagtac
ggccccgggggacgagtgaaagtggtgaacagagtttacacgggaccaactgaaattgag
gatgaaaatggactgaagaaacagacggatgagcacctggctcttgctgtgctaaaccgc
tgggaagatatgccaaggatcggctgcaaactcgtcccagagcacgtggagacgaggcct
ctcctgaatccggataaacctgggatggagcagggaaggattgagttgtgggtggacatg
ttcccgaaggacatgcctgcgcctggacccgctctcgatatttcaccaaggaagccaaag
aagttcgagctcagggtgatcgtgtggaacacggacgaagtcgttctggaggacgatgac
attttcacaggggaaaaatccagtgacatatttgttagaggatggctaaaaggccaacaa
gaagacaagcaggacacagacgtccactatcactctctgaccggagagggcaatttcaac
tggcgcttcgtttaccccttcgactacctacaggccgaagagaaaatcgtcatctcaaag
aaagagtccatgttttcttgggacgagactgagtataaaattcctgcccgactgaatttg
caagtgtgggatgcggatcacttctctgcagacgacttcttgggtgcaattgaactagac
ctgaatcgatttcctcgtggtgcaaagacagcgaagcagtgctccattgacatggtgctt
aacgagcaagacatgcccatggtcaacatcttcaaacagaagagaattaaaggctggtgg
ccatttgtggcccgagatgaaaatgatgagttggaaattacagggaaagtagaagcagag
cttcacctgctgacaggtgaggaggccgagaagagtcctgttggtgaaggacgcaataga
tcccatattcctttccgtcctgacacaaccttcctgtggttcatcagtccgctcaaagca
atccgctatctaatctgcaacaactacaagtggctaatcatcaaaattgtggtggttctg
ttgttattagtgatgctgggcttgtttctgtacagtatgccaggctacatggtgaaaaag
cttctaggggcttga
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integrated database retrieval system
