Sinocyclocheilus rhinocerous: 107753681
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Entry
107753681 CDS
T04916
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107753681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107753681
Enzymes [BR:
srx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107753681
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107753681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
XRCC4
Motif
Other DBs
NCBI-GeneID:
107753681
NCBI-ProteinID:
XP_016425368
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAVRPPIKMEERQYSSLTAPMDYLQYWYQTNSQQYQAEQVPQYHQMVNAAQYAERPVEDK
IMTDLSVHQDPYLDQPQQLHQLSAQPPALPTTPAKGKKRGRPPKGEGKEKTEAEESAKKA
KRMLDRFNGMSVEEVMARKLPDIITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLY
LSGLTEEQLNHMHDQTLPERYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQKYRP
LIAVFNGKCIYETFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQD
KVHFFIKLKELRDQMKGVVRTQEIQETNYSFDLTVAKEDAKRLAIKEEQHDPGYEETCAQ
GSQQHPQQAFGVHPSPDTDQVSDNWWTMQPFADQIPDIRCSNSN
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagaccaccaattaagatggaagaaaggcagtattcatctctgacggcccct
atggattatcttcagtactggtatcaaaccaattctcagcagtaccaggcagagcaggtg
ccacagtaccaccagatggttaatgccgcccaatacgccgagagacctgtggaggacaaa
atcatgactgatctttcagtgcatcaagatccatatctggatcaacctcagcagcttcat
caactctctgcccaaccaccagcccttccgacgactccagcaaaaggaaagaaaagagga
aggcctccaaaaggtgaaggaaaggagaagacggaagctgaagagtctgccaagaaagcg
aagaggatgttagatcggttcaacgggatgtcagtggaggaagtcatggctagaaagctg
ccagacatcatcacacataatcttgacatgctgattatcggcatcaatcctggacttttg
tcagcctacaagggaaggcattatccaaatcctgggaaccacttttggaaatgcctatat
ctttctgggctgactgaggaacagctcaaccacatgcatgatcagacgcttcctgaacgg
tatggcattggtttcacaaatatggtggagaggacaacacctgggagtaaagacctatca
aacaaagagatccgtgaaggtggccaccagcttttggaaaagctccagaagtacagacct
ttaatcgctgtgttcaatggaaaatgtatttacgaaacattttgcaaggagatttttgga
gtaaaggctaagaacttagagttcggattgcagccttacaaagtgccggaaacagagacg
gtttgctatctgatgccatcatcaagcccacgctgtgcccagtttcctcgtgctcaggac
aaagtgcacttcttcatcaagttaaaggagctcagggatcaaatgaagggagtggtgagg
actcaagagatccaagagacaaactactcatttgatctgactgtggccaaagaggatgcc
aaaagactggcaatcaaagaagagcagcatgaccctggatatgaggagacctgtgcccag
ggatcacagcagcacccacagcaagcatttggggtccatccttctccggacacagaccag
gtatcggacaattggtggacaatgcagccgtttgcagaccagattccagacatcagatgt
agcaacagcaactga
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