Sinocyclocheilus rhinocerous: 107756566 Help Entry 107756566         CDS       T04916                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism srx  Sinocyclocheilus rhinocerous Pathway srx04115   p53 signaling pathway srx04145   Phagosome srx04148   Efferocytosis srx04350   TGF-beta signaling pathway srx04510   Focal adhesion srx04512   ECM-receptor interaction srx04518   Integrin signaling srx04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:srx00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     107756566   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107756566    04518 Integrin signaling     107756566  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107756566    04148 Efferocytosis     107756566   09143 Cell growth and death    04115 p53 signaling pathway     107756566   09144 Cellular community - eukaryotes    04510 Focal adhesion     107756566   09142 Cell motility    04820 Cytoskeleton in muscle cells     107756566  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:srx04131]     107756566   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:srx00536]     107756566 Membrane trafficking [BR:srx04131]  Endocytosis   Phagocytosis    Opsonins     107756566 Glycosaminoglycan binding proteins [BR:srx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107756566 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 Laminin_G_3 TSP1_ADAMTS cEGF EGF Laminin_G_2 TSP1_CCN Motif Other DBs NCBI-GeneID:  107756566 NCBI-ProteinID:  XP_016429225 LinkDB All DBs Position Unknown AA seq 1179 aa AA seqDB search MKSSAIFLLLMLWNCESARVAESRDDNSVFDLFELVQVPRKNHGVTLVKGDDPYSPAYKI LNPDLIPAVPESAFRDLIDSIHAERGFLLLVNFKQFKHTRGSLLTVEKKDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKSAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNSIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TDEKNMLMSRMGIHHGVCLHNGIVHKNKEEWTVDDCTECTCQNSATVCRKISCPLIPCAN ATVPDGECYGIALLLSHFALSTASDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINN NCEGTSVQTRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEG KDCQGEGRQTERCEKSPCPINGGWGPWSPWDTCSATCGGGVQNRKRLCNNPVPVYGGKDC VGDAKANQLCNKQACPIDGCLSNPCFGGAQCTSFPDGSWKCGKCPTGYTGNGINCKDINE CKEVPDACFEFNGVHRCENTVPGYNCLPCPTRYTGPQPFGRGVEDAASKKQVCTPRNPCL DGSHDCNKNARCNYLGHFSDPMYRCECKPGFAGNGLICGEDTDLDGWPNADLVCVENATY HCKKDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVG DRCDNCPYNSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNVDQKDTDLDGVGD QCDNCPLEHNPDQLDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKG DACDYDDDNDGIPDDKDNCRLVPNPDQLDSDGDGRGDACKDDFDHDNVLDIYDVCPENFD ISETDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGT FFINTDRDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTG PGEHLRNALWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKI MADSGRIYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDV NT seq 3540 nt NT seq  +upstreamnt  +downstreamnt atgaagtcatctgcaatctttttgctactgatgctatggaactgcgagagcgcgcgagtc gcagaaagtcgagacgacaacagtgttttcgatctgtttgagctcgtccaagtgccgagg aagaaccacggggtgactctggtgaaaggcgacgacccatacagccccgcctacaagatc ctgaaccccgacctgattcccgcggttcccgagagcgccttcagggacctaatcgattcc attcacgcggagagaggatttctgctcctggtcaatttcaagcagttcaaacacacgagg ggaagccttttgaccgtggagaagaaagatggctccggacccgtattcgaaatcgtttcc aacgggaaagctaacactctggacattgttttttccactgaaaacaagcaacaggtcgtg tccatcgaggaagcggatttggcggtgggacattggaaaaacatcactcttttcgtgcag gaggacagggttcagttctatgtgggatgtgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccaggtgtggcgagcctgaggatcggcaag agcgcagtgaaggacaggttcatgggggtgctgcaaaacgtgcgctttgtgttcggaacc acactggaagcaattctgaggaataaaggatgccaaaactcaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgcgaggacctggctgccatgttc aaggaactgaaaggtcttggtgtggtggtgcaagagctgtccaatgaactccgcaaagtg acggatgagaaaaacatgctcatgagtcgcatgggcattcatcatggtgtctgtcttcac aatggaattgtgcacaaaaacaaggaagaatggacagtggatgattgcacagagtgcact tgccagaactctgcaacagtgtgccgcaagatttcatgtcccctaatcccatgcgcaaat gccacagtgcctgatggggagtgctacggaatagctctgctattgtctcattttgctctc tcgacagcgagcgactccgctgaggatggctggtccccctggtctgaatggacccattgt tctgtgtcctgtggaaggggcattcagcagcgtggccgctcctgcgaccgcatcaataac aactgtgaaggcacgtcagtgcagacgagagactgctaccttcaggagtgtgacaagcgc tttaaacaagatggcagctggagtcactggtcaccctggtcttcctgctcagtgacctgt ggtgctggcgttatcacacgcatccgtctctgcaactccccaacacctcagatggaaggc aaagattgccagggtgaaggtcggcaaactgagaggtgtgagaaatcaccatgtccgatc aatggtggctggggaccatggtcaccctgggatacttgctctgccacctgtggcggtggc gtccaaaaccgtaaacgtctttgcaataatccagtacctgtgtatggcggcaaagactgt gtgggagatgcaaaggccaaccagctttgcaacaagcaagcctgtccaattgatggatgc ctttcaaatccatgctttggaggagcccagtgtacaagcttcccagatggctcttggaaa tgtggaaaatgcccgacaggatacactggcaatggaatcaactgcaaggatatcaatgag tgtaaggaggtccctgatgcctgctttgaatttaatggagtccataggtgtgagaacaca gtgccaggctacaactgcctgccgtgccccactcgctacacaggcccacagccgtttggt cgaggagtggaggacgctgcttccaagaaacaggtctgcacgcctcgtaatccctgcctc gatggaagccacgactgcaataagaacgctcgctgcaactacctgggccatttctcagac cccatgtaccgctgtgagtgcaaacctggctttgctggaaatggactcatctgtggagag gacactgatcttgatggctggccaaatgctgatcttgtgtgtgtcgagaatgcaacctat cactgcaagaaggacaactgccccaatcttcccaattctgggcaagaggactatgacaag gatggaattggtgatgcttgtgataatgatgatgacgacgatggcattcctgatgacagg gacaactgcccactcatcttcaacccaagacagtatgactatgatcgcgatgacgtggga gaccgctgcgataactgtccatacaacagcaacccagaccagactgacactgacaacaat ggtgaaggtgacgcctgtgctgtggacattgatggagatggtattttgaatgagaacgac aactgcccatatctgtacaacgtcgaccagaaagacaccgatctcgatggagttggtgac cagtgtgacaactgccctctggaacacaatccagaccagctcgactccgattctgaccgt gtcggagacaaatgtgacagcaaccaggatatcgatgaggacggtcaccaaaacaacctg gacaactgcccatacattcctaatgctaaccaggctgatcacgacaaggatggtaaagga gatgcctgcgactatgatgatgataatgatggcatccctgatgacaaagacaactgcaga ttggttcccaatccagatcaactggattctgatggcgatggacgtggtgatgcctgcaaa gatgactttgaccacgacaatgtcctagatatctatgatgtctgtccagagaactttgac atcagtgaaaccgacttccgcaaattccagatggttcctcttgatcccaagggcacttct cagatcgaccccaactgggtggttcgtcaccaaggaaaagaactggttcagacagtcaac tgcgaccccggcattgctgttggttttgatgagtttaattcagtcgacttcagtggaaca ttcttcatcaacacggatagggatgatgactacgctggcttcgttttcggataccagtcc agctctcgcttctacgtggtcatgtggaagcagatcacacaaacctactggtccagcaca cctaccaaggcacagggttactcagggctgtcaatcaaagtggttaactccaccacaggg ccaggcgagcatctgaggaacgccctctggcacaccggagacactccaggacaggtgcgc acactgtggcacgacccaaagaatgtgggatggaaggacttcactgcttacagatggcac ttgactcatagaccaagaactgggcacataagagtggtcatgtatgaaggcaaaaagatc atggcagattctggaagaatttatgacaaaacatacgcaggcggaagactgggtctcttt gtcttctcacaagagatggtgtacttctcagacctcaaatatgaatgcagagatgtgtaa

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