Serratia plymuthica S13: M621_06375
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Entry
M621_06375 CDS
T02716
Name
(GenBank) 2-oxoglutarate dehydrogenase E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00020
Citrate cycle (TCA cycle)
sry00785
Lipoic acid metabolism
sry01100
Metabolic pathways
sry01110
Biosynthesis of secondary metabolites
sry01120
Microbial metabolism in diverse environments
sry01200
Carbon metabolism
sry01210
2-Oxocarboxylic acid metabolism
Module
sry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
M621_06375
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M621_06375
Enzymes [BR:
sry01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
M621_06375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Caps_syn_GfcC_N
DUF1521
Motif
Other DBs
NCBI-ProteinID:
AGP43471
UniProt:
S4YGJ8
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All DBs
Position
1347473..1350280
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AA seq
935 aa
AA seq
DB search
MQNGAMKAWLDSSYLAGANQSYIEQLYEDFLTDPGSVEDSWRSIFQQLPTAGVKPDQLHS
QTRDYFRRLAKDSARYNTTINDPDTDAKQVKVLQLINAFRFRGHQHANLDPLGLWQQETV
ADLDPAYHNLTDADFQETFNVGSFAIGKETMKLGDLYAALKQTYCGSIGAEYMHITNTEE
KRWIQQRIESVAGRASFTNEEKRRFLNELTAAEGLERYLGAKFPGAKRFSLEGGDALVPM
LKEMVRHAGKNGTREVVLGMAHRGRLNVLINVLGKKPADLFDEFAGKHKEHLGTGDVKYH
QGFSSDVETEGGMVHLALAFNPSHLEIVSPVVMGSVRARRDRLDEARSNMVLPITIHGDA
AITGQGVVQETLNMSQARGYEVGGTVRIVINNQVGFTTSNPLDARSTQYCTDIAKMVQSP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPVMYQKIK
KHPTPRKLYADVLTEQKVASLEDATEMVNLYRDALDRGDCVVEEWRPMNLHSFTWSPYLN
HEWDEEYPSKVEMKRLQELARRISTVPEAIEMQSRVAKIYGDRAEMAAGNKAFDWGAAET
LAYATMVDEGIPIRISGEDAGRGTFFHRHAVVHNQKNGSVYVPLANVHSGQGEFKVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPLAISSLEELANGTFLPAIGEIDELDPKEVKRVVMCSGKVYYDLLEQRRKNDQK
DVAIVRIEQLYPFPHQAVQAVLEKYAHVHDFVWCQEEPLNQGAWYCSQHNFREVVPFGAS
LRYAGRPASASPAVGYMSVHQKQQQALVNDALNIE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggcgcgaaccag
tcttacatagaacagctctatgaagacttcttaaccgatccgggctccgttgaagatagc
tggcgttccatttttcaacagctaccaaccgcgggtgttaaacccgatcagcttcactct
caaacgcgtgactacttccgccgcctggcgaaagattctgcgcgttacaataccaccatc
aacgatccagacaccgacgccaaacaggtcaaggtactgcagctgatcaacgccttccgt
ttccgcggacatcagcatgccaatctcgatccgctcggcctgtggcagcaagagaccgtt
gctgacctcgatcccgcttaccacaatctgaccgacgccgacttccaggaaaccttcaac
gtgggttcttttgccatcggcaaagaaaccatgaagttgggcgacctgtatgctgcgctg
aagcagacttactgcggttcgatcggtgcggaatacatgcatatcaccaataccgaagag
aaacgctggatccaacagcgcatcgaatcggtagcgggacgcgccagctttactaacgaa
gagaaacgccgtttcctgaacgagctgaccgcagcggaaggtctggaacgctatctcggc
gctaaattcccgggagcgaaacgcttctctctggaaggcggcgatgcgctggtgcccatg
ctgaaagagatggttcgccacgccggcaagaacggcacgcgcgaagtggtgctgggtatg
gctcaccgcggccgtctgaacgtgttgatcaacgtgctgggtaaaaagcccgccgacctg
ttcgacgagtttgccggcaagcacaaagaacacctcggtaccggtgacgtaaaatatcac
cagggcttctcctccgacgtcgaaaccgaaggcggcatggttcacctggcgctggcgttc
aacccgtcgcacctggagatcgtcagcccggtggtgatgggttccgtacgtgcccgccgc
gatcgtctggacgaagcgcgcagcaacatggtgctgccaatcaccatccacggtgacgcc
gccattaccggccagggcgtggttcaggaaaccctgaacatgtcgcaggctcgcggttac
gaagtgggcggcacggtgcgtatcgtcatcaacaaccaggttggtttcaccacctccaac
ccgctggacgcgcgctcgacccaatactgtaccgatatcgccaaaatggtgcagtcaccg
atcttccacgtcaatgctgacgatccggaagcggtggcgttcgttacccgtctggcgttg
gatttccgtaacaccttcaaacgcgatgtgatgatcgatctggtctgctaccgtcgtcat
ggacataacgaggccgacgagccaagtgcaacccagccggtgatgtaccagaagatcaaa
aaacacccgacgccgcgcaagctttatgctgacgttcttaccgaacagaaagttgccagc
ctggaagatgccacggaaatggtcaacctgtatcgcgatgcgctcgatcgtggcgattgc
gtggttgaagaatggcgtccgatgaatctgcattcctttacctggtcgccgtacctgaac
cacgagtgggacgaagagtacccaagcaaggttgagatgaagcgcttgcaggaactggct
cgtcgcatcagcaccgtaccggaagcgatcgaaatgcagtcgcgcgtagcgaaaatctac
ggcgaccgtgcagagatggccgcaggcaacaaagcgttcgactggggtgcggctgaaacg
ctggcctacgccactatggtcgatgaaggcattccgattcgcatttccggtgaagatgcc
gggcgcgggaccttcttccaccgtcatgctgtggtgcataaccagaaaaacggttcggtc
tacgttccgctggcgaatgtgcacagtgggcagggcgagtttaaagtctgggattccgtg
ctgtctgaagaagcggtgctggcgttcgaatacggctacgccactgcggaaccgcgcacc
ctgaccatctgggaagcgcagttcggtgacttcgccaacggcgctcaggtggtgatcgac
cagttcatcagttccggcgagcagaaatggggccgtatgtgtggcctggtgatgctgctg
ccgcacggttacgaaggccagggtccggagcactcctccgcgcgtctggaacgttacctg
cagctgtgtgcggaacaaaatatgcaggtgtgcatcccgtccaccccggcgcaggtttac
catatgctgcgtcgtcaggcgctgcgcggtatgcgccgtccgttggtggtgatgtcaccg
aaatccctgctgcgtcacccgctggcgatttcttctctggaagaactggctaacggcacc
ttcctgccggctatcggcgagattgacgagctggatccgaaagaggtcaaacgcgtggtg
atgtgctccggtaaggtctattacgatctgctggaacagcgccgcaagaacgaccagaaa
gacgtggccatcgtacgtatcgagcagttgtatccgttcccgcaccaggccgttcaggcc
gtgctggagaagtatgctcacgtgcatgatttcgtctggtgccaggaagagccgctgaac
cagggcgcctggtactgcagccaacacaatttccgtgaagtcgtgccgttcggggcttct
ttacgttacgccggacgtccagcctccgcctctccggcggtcggttatatgtccgtacac
cagaagcagcaacaggctctggttaatgacgcgctgaatattgaataa
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