Streptococcus sanguinis: SSA_1484
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Entry
SSA_1484 CDS
T00473
Symbol
ligA
Name
(GenBank) DNA ligase, putative
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ssa
Streptococcus sanguinis
Pathway
ssa03030
DNA replication
ssa03410
Base excision repair
ssa03420
Nucleotide excision repair
ssa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSA_1484 (ligA)
03410 Base excision repair
SSA_1484 (ligA)
03420 Nucleotide excision repair
SSA_1484 (ligA)
03430 Mismatch repair
SSA_1484 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssa03032
]
SSA_1484 (ligA)
03400 DNA repair and recombination proteins [BR:
ssa03400
]
SSA_1484 (ligA)
Enzymes [BR:
ssa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SSA_1484 (ligA)
DNA replication proteins [BR:
ssa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SSA_1484 (ligA)
DNA repair and recombination proteins [BR:
ssa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SSA_1484 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSA_1484 (ligA)
MMR (mismatch excision repair)
DNA ligase
SSA_1484 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SSA_1484 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-ProteinID:
ABN44878
UniProt:
A3CNX3
LinkDB
All DBs
Position
complement(1490320..1492278)
Genome browser
AA seq
652 aa
AA seq
DB search
MKERMSELVELLNRYAHEYYTADRPSVSDSEYDRLYRELAELEEKYPTDILPDSPTHRVG
GKILEGFEKYPHQYPLFSLQDAFSREELLAFDQRVRKEFPQVSYLCELKIDGLSISLTYE
NGILVAGATRGDGSVGENITENLKRVKDIPLTLKEPLDITVRGECYMPKASFDAVNQLRQ
ENGEPEFANPRNAAAGTLRQLDTAVVAKRNLATFLYQEASPTQVGSQEEVLNKLADLDFS
VNPTHILADSIESVWEFIEKIAEERDSLPYEIDGIVIKVNDLAVQEELGFTVKAPKWAIA
YKFPAEEKEAQLLSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRQK
DTVIVYKAGDIIPAVLRVVESKRVSEEALEVPSHCPSCESELVHFEDEVALRCINPLCPA
QIKEGLIHFASRDAMNITGLGPAVVEKLFAQNLVKDVAGIYRLTIENLLELENFKEKSAN
KLYTAIQASKKNSAERLLFGLGIRHVGSKASRILLEKFHDIPRLSQASQEEIAAIDSLGT
VIAQSLHTYFEQEGSQILLAELQEAGVNLDYLGQKAAADAALSGMTVVLTGKLQKLTRNQ
AKEKLQSLGANVSGSVSKKTDLVVAGADAGSKLAKAQELGIEIRDEDWLDSL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagaatgtcagaattagtagaattgctcaatcgatacgcccatgaatattat
acggcagataggccaagcgtatcggacagcgagtatgacagactctatcgtgagttagcg
gagttagaagaaaagtacccaaccgatatcctgcctgacagtccgacgcatcgggtgggc
gggaagattttagaaggatttgaaaaatatccacaccagtatcctctctttagtttgcag
gatgctttttcacgtgaagaattactagcctttgaccagcgggttcgcaaggaatttcca
caagtttcttatctttgtgaactcaagattgatgggctctctatttccctgacctatgaa
aatggaatcttggtagcaggagcgactcggggggatggttctgttggtgaaaacattact
gaaaatctcaagcgagtcaaggatattccactgactttgaaagaaccgctggacattacg
gttcgcggagagtgctatatgcccaaggcatcctttgatgcggtcaatcagctgcgacag
gaaaatggtgagcctgagtttgccaatccacgtaatgcagcagcgggaaccttgcgccag
ctggacacagcagttgtggctaagcgcaatctagcgactttcctataccaagaagccagt
cctactcaggttggcagccaagaagaggtcttaaacaagctggcagatttggacttctca
gtcaatcctactcatattctggcggactctattgaatcagtttgggagtttatcgaaaag
atcgctgaggagcgggatagcctgccttatgaaattgacggtattgtcatcaaggttaat
gacttggcggtgcaagaggagcttggctttactgtcaaggcacctaagtgggctatcgcc
tataagtttccagctgaggaaaaggaagcccagcttctatctgttgactggacagtgggt
cggacgggagttgtgactccgacagctaatctgacgcctgttcagctagcgggaacgaca
gttagccgagcgaccttgcacaatgtggactacattgccgagaaggatattcgtcagaaa
gacacagttatcgtctataaagcaggagatattattccagctgtcttgcgagtggtcgag
tccaagcgggtgtcagaagaggctttggaagtgccaagccattgtccaagctgcgagagt
gagctagtgcactttgaagacgaagtggctctgcgctgcattaacccgctctgtccagcc
cagatcaaggagggcttgattcactttgctagccgggatgccatgaacattaccggcctt
ggtccagcagtggtagagaagctctttgctcaaaatctagtcaaggatgtggctggaatc
tatcggctaacgatagaaaatttactagaactagagaactttaaggaaaaatcagcaaat
aagttgtatactgctattcaagcttccaagaaaaactcagctgaacgcctcttgtttggc
ttggggattcgccatgtgggaagcaaggccagtcggattttgctggagaaattccatgat
attcctaggttgtctcaggccagccaagaagagattgcggctatcgacagtcttgggacg
gtgattgcccaaagcctgcatacctattttgagcaggaaggctctcagattcttttggct
gagctgcaagaagcaggtgtaaatctggactatctggggcaaaaggcagcggcagatgca
gccctatcaggtatgacggttgtcctgactggtaaattacaaaaattgacacgcaatcaa
gctaaagaaaaattgcagagtctgggtgccaatgtttccggatctgtttctaaaaaaacg
gatctggtagtggctggcgcagatgctggcagcaagctagccaaggctcaggagttagga
attgaaattcgggatgaagattggcttgatagcttatga
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integrated database retrieval system
