Swingsia samuiensis: E3D00_03010
Help
Entry
E3D00_03010 CDS
T06080
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ssam
Swingsia samuiensis
Pathway
ssam01501
beta-Lactam resistance
ssam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D00_03010
01503 Cationic antimicrobial peptide (CAMP) resistance
E3D00_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssam03036
]
E3D00_03010
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_03010
01504 Antimicrobial resistance genes [BR:
ssam01504
]
E3D00_03010
Chromosome and associated proteins [BR:
ssam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E3D00_03010
Transporters [BR:
ssam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E3D00_03010
Antimicrobial resistance genes [BR:
ssam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E3D00_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
KBP_C
Motif
Other DBs
NCBI-ProteinID:
QDH16657
UniProt:
A0A4Y6UJW0
LinkDB
All DBs
Position
646481..647662
Genome browser
AA seq
393 aa
AA seq
DB search
MASSPKIFAIAGSCLLAAYVGFIVIEKAHTASTLKADTDASAVYNVSIVNAIKSPQKVAL
TLPGTIDAWYQAPIYPQVSGYVKMWYKDYGAHVKAGDALAEINAPALDAEYQQAKADLNA
VLAKYHLAAVTAERWRAMGRSQSVSGQSVSVSNANEQSARAEVAAAQHNVDHFEALEKFK
TIVAPFDGVVTAREINVGDYVHNGGGNLSATGSASELFTVADVQKLRLFVSVPEVFSYIL
QPDLTATVSVPQYRGRTFEAHYLTTSHGFDPNTRTAVAEFTLDNQNEELWPGTFASAALK
SHNEDTQLYEIPTSALVFEEKGMQVAVVDTSNHVHYKNITIGRMADTSTEVQSGISPNDR
IIANPPADLLEGDPVNVVQGERGYNQSGFGKSQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccagctctcctaaaatcttcgctatcgcgggaagctgccttctcgctgcttacgtt
ggctttatcgtgattgaaaaggctcatacggcctctacattaaaggctgatacagacgcc
agcgctgtctataacgtttccatcgtcaacgcgataaagtccccccaaaaggttgctctt
acccttccgggcaccattgatgcttggtaccaagcccctatatacccgcaggtctctggc
tatgtgaaaatgtggtacaaagactatggtgcccatgtgaaggctggagatgcccttgct
gaaattaatgcaccagcattagacgccgagtaccaacaagcaaaagctgatttaaacgct
gttctagccaaatatcatttggcggcagtcacagctgagcgttggcgcgccatggggcgt
tcgcagtctgtttcaggccagtctgtttctgtctccaatgcgaacgagcaatctgcccga
gcagaagttgcagcagctcaacataatgtggatcacttcgaggcgttagagaaattcaaa
acgattgttgcgccgttcgatggtgtcgtcaccgcacgtgaaatcaacgtcggtgattat
gtccataatggtggagggaacctaagcgcaacaggaagtgcttctgaacttttcaccgtt
gcagatgtacaaaaactacgtctttttgtttcggtaccagaagtcttttcttatatcctt
caacctgatttaacggcaacggtcagtgtccctcaatatcgtggccgtacattcgaagcc
cattatcttacaacgtctcacgggtttgaccccaacacacgtacagccgttgctgaattt
acgcttgataaccaaaatgaagagctatggcccggaacttttgcctcagctgcgctaaaa
tcacataatgaagacacgcaactgtatgaaattccgaccagtgctctcgtttttgaagaa
aagggcatgcaagttgctgttgtcgacaccagcaaccatgtccactataaaaatatcacg
atcggtcgcatggctgacacctccacagaggtacaatcaggcattagccccaatgatcgc
atcatcgccaacccaccggctgatctcttggaaggggatccagtaaatgttgtgcaaggc
gaacgaggatataaccaatccggcttcgggaaatcacaatga
DBGET
integrated database retrieval system
