Spironucleus salmonicida: 94296182
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Entry
94296182 CDS
T10465
Symbol
SS50377_22159
Name
(RefSeq) Zinc finger domain-containing protein
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ssao Spironucleus salmonicida
Pathway
ssao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
94296182 (SS50377_22159)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssao04121
]
94296182 (SS50377_22159)
Enzymes [BR:
ssao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
94296182 (SS50377_22159)
Ubiquitin system [BR:
ssao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
94296182 (SS50377_22159)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
zf-CHY
zf-RING_11
Prok-RING_4
zf-C3HC4_3
TypeIII_RM_meth
Motif
Other DBs
NCBI-GeneID:
94296182
NCBI-ProteinID:
XP_067767368
LinkDB
All DBs
Position
2:1746729..1747955
Genome browser
AA seq
408 aa
AA seq
DB search
MKRSFSPQNYTKVQIAKLFKLKPGTTDRFDIRNRLILREYISDTIGEDQVNSINTENPIY
SFPTAFYNDIDPVRTILHDFHNSQAYTPNWLYTTPADEIVFEIYHISEAVGCAHYLANCT
FGCKKCENLYGCKYCHDGVEDHTFCLSEICCRDCKKLQNFSSKCQFCDLKFGEVSCQPCS
FICHIGTDIKPFFHCNECGHCRVGKQDDFIHCKKCKRCIGKEEVLSHICKELGTCSICLD
EIEQSNKGFLMPNCGHAIHGHCMDQLRGISCPVCRKTLLDDNRIEQIKYKMQADRGKKIT
PEIFCKGQCWDCMEMFVSPVAGVICQKCRFVNCERQDQASKDEYTAYKNKFKNFFEIDRV
VGIEEALQMVDGEDILNYTQNNRDNNLIFHLYNRINDMIASRGVESEK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgctctttttcaccataaaattatacgaaagtataaatagctaagctattcaag
ctgaaaccaggcactactgaccgttttgatataagaaataggcttatcttgcgtgagtat
atttctgacactatcggtgaagatcaagttaattctattaataccgaaaatccgatatac
tcattccccacagctttttataatgatattgatccagttcgcacgattttgcatgatttc
cataactcctaggcttacaccccaaattggctctatacaacacccgcagacgaaattgtt
tttgagatttaccacatttccgaggcggtgggttgtgctcattatcttgcaaattgtact
ttcgggtgtaaaaaatgtgaaaacttatacggctgtaagtactgccatgatggagttgag
gaccacacattttgcctatcggaaatttgctgcagagactgcaagaaattataaaatttc
agctcaaaatgttaattttgcgatctcaagttcggagaagtttcatgctagccatgtagt
tttatatgccacattggaactgatataaaacctttttttcactgcaatgaatgtggacac
tgcagagttggaaaataggatgattttattcattgtaaaaagtgcaaacgttgtattgga
aaggaggaagtgctaagtcatatttgcaaagagttagggacgtgtagtatttgtttagac
gaaattgagcaaagcaataaaggcttcctgatgccaaactgtggacatgcgattcatggg
cattgtatggactaactgcgtggaattagctgcccggtttgtcgtaaaacgcttttggat
gacaatcgaatcgaacaaattaagtataagatgtaggccgacagaggcaagaagatcaca
ccagaaatattttgtaaaggccaatgctgggattgcatggagatgtttgtttcaccagtt
gctggagtaatttgctaaaagtgtaggttcgtaaattgtgagcgttaagatcaggcgtca
aaggatgaatacactgcttataaaaataaatttaaaaattttttcgaaattgatagagtt
gtaggtatagaggaggcactttaaatggttgatggcgaagatattttgaattacacacaa
aataatagagacaacaatttaattttccacttatataatagaattaatgatatgattgca
agtagaggagttgaaagtgaaaaatga
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