Sphingomonas sabuli: H8M03_04815
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Entry
H8M03_04815 CDS
T07540
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ssau
Sphingomonas sabuli
Pathway
ssau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H8M03_04815 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssau03400
]
H8M03_04815 (nth)
Enzymes [BR:
ssau01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H8M03_04815 (nth)
DNA repair and recombination proteins [BR:
ssau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H8M03_04815 (nth)
Prokaryotic type
H8M03_04815 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNM83649
UniProt:
A0A7G9L4V0
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All DBs
Position
958332..959039
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AA seq
235 aa
AA seq
DB search
MKKDEVFEFFRRLAEDNPSPTTELESVNPFTLLVAVVLSAQATDASVNVACRPLFKKVTA
PQQMVDLGEEALRDHIKTIGLFNTKAKNVIALSQALVRDHGGEVPRTREELQALPGVGRK
TANVVLNTAFGEETFAVDTHVFRVGNRTGLAPGKTPDAVEAKLEGIVPQPFRRDAHHWLI
LHGRYTCKARTPECWRCVVADLCRYKPKTPPPGEKQTKPKSVRSARPKSSKVRTG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaagacgaggtcttcgaattcttccgccgcttggcggaggacaacccgtcgccg
acgaccgaactggaatcggtcaaccccttcaccttgctggtcgcggtggtcctgtccgcg
caggcgaccgacgccagcgtcaacgtcgcctgccggccgctattcaaaaaagtcaccgcg
ccgcaacagatggtcgacctgggcgaagaggccctgcgcgatcacatcaagaccatcggc
ctgttcaataccaaggcaaagaacgtcatcgcgctgtcccaggcgctggtgcgcgaccat
gggggcgaggtgccgcgcacgcgggaggagttgcaggccttgcccggagtcggccgcaag
accgccaatgtcgtgctcaacacggcctttggtgaggagacgttcgcggtcgacacgcac
gtctttcgcgtcggcaatcggaccggcctggcgccgggcaagacaccggacgccgtcgag
gccaagctggaagggatcgtaccgcagcccttccgccgcgatgcacatcactggctgatc
ctgcacggccgctacacctgcaaggcgcgcacgccggaatgctggcgctgcgtggttgcc
gacctgtgccgctacaagcccaagaccccgccgccgggcgagaagcagactaagcccaag
tccgttcgaagcgcgcgcccaaagtcgtcaaaagttcgtactggctaa
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