KEGG   Sus scrofa (pig): 100127466
Entry
100127466         CDS       T01009                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100127466 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100127466 (SMNDC1)
Spliceosome [BR:ssc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100127466 (SMNDC1)
 Complex B
    100127466 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100127466 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100127466
NCBI-ProteinID: NP_001159781
Ensembl: ENSSSCG00000030507
UniProt: C9VZF4
LinkDB
Position
14:complement(120726077..120739673)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGSKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASSESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccaacaagttgaa
gctgctctctctggaaatggagaaaatgaagatttgctaaaattaaagaaagatttacag
gaagttatagaattaaccaaagaccttctgtcaactcaaccttctgaaactcttgcaagt
tcagacagctttgcttctactcagcccacacattcgtggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagattgaggagatagatgaagaa
aacggcaccgctgcaatcacctttgctggctatggcaatgctgaagtgactccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcagcaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcgcagagaataaaagaacttgagcaggaaagagaagaccagaaggtgaaatggcaacag
ttcaacaatagagcctattctaaaaataaaaaaggccaggtaaagaggagtatttttgct
tcatctgagagtgtaactggcaaagttggagttggaacatgtggaattgctgataaacct
atgacacaatatcaagatacctccaaatacaatgttaggcatttgatgcctcaataa

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