Sus scrofa (pig): 100157996
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Entry
100157996 CDS
T01009
Symbol
SLA-DOA
Name
(RefSeq) SLA class II histocompatibility antigen, DO alpha chain precursor
KO
K06752
MHC class II antigen
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04145
Phagosome
ssc04514
Cell adhesion molecules
ssc04612
Antigen processing and presentation
ssc04640
Hematopoietic cell lineage
ssc04658
Th1 and Th2 cell differentiation
ssc04659
Th17 cell differentiation
ssc04672
Intestinal immune network for IgA production
ssc04940
Type I diabetes mellitus
ssc05140
Leishmaniasis
ssc05145
Toxoplasmosis
ssc05150
Staphylococcus aureus infection
ssc05152
Tuberculosis
ssc05164
Influenza A
ssc05166
Human T-cell leukemia virus 1 infection
ssc05168
Herpes simplex virus 1 infection
ssc05169
Epstein-Barr virus infection
ssc05310
Asthma
ssc05320
Autoimmune thyroid disease
ssc05321
Inflammatory bowel disease
ssc05322
Systemic lupus erythematosus
ssc05323
Rheumatoid arthritis
ssc05330
Allograft rejection
ssc05332
Graft-versus-host disease
ssc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100157996 (SLA-DOA)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100157996 (SLA-DOA)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100157996 (SLA-DOA)
04612 Antigen processing and presentation
100157996 (SLA-DOA)
04658 Th1 and Th2 cell differentiation
100157996 (SLA-DOA)
04659 Th17 cell differentiation
100157996 (SLA-DOA)
04672 Intestinal immune network for IgA production
100157996 (SLA-DOA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100157996 (SLA-DOA)
05164 Influenza A
100157996 (SLA-DOA)
05168 Herpes simplex virus 1 infection
100157996 (SLA-DOA)
05169 Epstein-Barr virus infection
100157996 (SLA-DOA)
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100157996 (SLA-DOA)
05152 Tuberculosis
100157996 (SLA-DOA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100157996 (SLA-DOA)
05140 Leishmaniasis
100157996 (SLA-DOA)
09163 Immune disease
05310 Asthma
100157996 (SLA-DOA)
05322 Systemic lupus erythematosus
100157996 (SLA-DOA)
05323 Rheumatoid arthritis
100157996 (SLA-DOA)
05320 Autoimmune thyroid disease
100157996 (SLA-DOA)
05321 Inflammatory bowel disease
100157996 (SLA-DOA)
05330 Allograft rejection
100157996 (SLA-DOA)
05332 Graft-versus-host disease
100157996 (SLA-DOA)
09166 Cardiovascular disease
05416 Viral myocarditis
100157996 (SLA-DOA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
100157996 (SLA-DOA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100157996 (SLA-DOA)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100157996 (SLA-DOA)
Exosomal proteins of epithelial cells
100157996 (SLA-DOA)
Exosomal proteins of breast milk
100157996 (SLA-DOA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
C2-set_2
Ig_2
Motif
Other DBs
NCBI-GeneID:
100157996
NCBI-ProteinID:
NP_001172072
Ensembl:
ENSSSCG00000001472
Vega:
OTTSUSG00000001390
UniProt:
A0A8D1ZXG7
A5D9K5
LinkDB
All DBs
Position
7:complement(25178866..25182665)
Genome browser
AA seq
250 aa
AA seq
DB search
MVLHGGLVLGLHILMTLLSPQKAGAIKADHMGSYGPAFYQSYDGSGQFTYDFDGEQLFSV
DLKKREAVWRLPEFSNFADFDPQNGLRGIALIRAHLDVLVERSNHTRATNVPPRVTVLPK
SPVALGQPNVLICIVDNIFPPVINITWLHNGQTVTEGVTQTSFYAQPDHSFRKFHYLTFV
PSAGDFYDCKVEHWGLDEPLFTHWEPQVTMPLPDTTETLVCALGLALGLVGFLVGVTLII
TGRRRSSSPR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccatggggggctggtcctgggactccacatcttgatgaccctcctgagtccc
cagaaagctggggccatcaaggctgaccacatgggctcctatggaccagccttctaccag
tcctatgacggctcgggtcagttcacctacgatttcgatggggagcagctcttctccgtg
gacctgaagaagagggaggctgtgtggcgtctgcctgaattcagcaacttcgccgacttt
gacccgcagaatgggctgagaggcattgcactgatcagagcccatctggatgtcttggtg
gagcgctccaaccataccagagccaccaatgtgcctccaagggtgaccgtcctccccaag
tcccctgtggcgctgggccagcccaacgtcctcatctgcatcgtggacaacatcttcccc
cctgtcatcaatatcacttggctgcacaacggccagacggtcaccgagggggtgacccag
accagcttctatgcccagcccgaccactcgttccggaagttccactacctgaccttcgtg
ccctcggcaggcgacttctatgactgcaaagtggagcactggggcctggacgagccgctc
tttacgcactgggagccccaggtgactatgccgctgccagacaccacagagaccctggtc
tgtgccctcggcctggcgcttggcctggtgggcttcctcgtgggtgtcacccttatcatc
acaggcagacgccggtccagctcccccaggtaa
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