Sus scrofa (pig): 100294703
Help
Entry
100294703 CDS
T01009
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100294703 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100294703 (KDM2A)
04121 Ubiquitin system [BR:
ssc04121
]
100294703 (KDM2A)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100294703 (KDM2A)
Enzymes [BR:
ssc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100294703 (KDM2A)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100294703 (KDM2A)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100294703 (KDM2A)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100294703 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100294703 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
100294703
NCBI-ProteinID:
NP_001153562
UniProt:
C3RZA6
LinkDB
All DBs
Position
2:complement(5238690..5357799)
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDRGPRRLSNRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSTSDSSRGSHNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELASSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGDEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaatgtagagtatatccagcgtggtggcttaagagaccctctgattttcaagaat
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgactatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcctagagttcagccataccaggctggagaacatggtgcagaggccg
tccacggtggatttcattgactgggtagacaacatgtggccaaggcatttgaaggaaagt
cagaccgaatcaacaaacgcgatcttggagatgcagtaccctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggattttggtggtacttctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcccacagacacattagtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatctataacattgaagatcggacacgggtt
ccaaataagttccgctatccgttctactatgagatgtgttggtatgtgctggagcgctat
gtgtactgcataaccaaccgttcccacctaactaaggaatttcagaaagagtcccttagc
atggatttggagttaaatgggttggagtccggaaatggggatgaggaagcggtagatcga
ggaccccggcgcttgagcaataggcgttctgttctcactagccctgtagccaatggggtc
aacctggattatgatggactgggtaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggattcaacctctgactctagccggggctcccacaatggacaagtgtgggat
tcccaatgtagcccccggaaggacaggcaggtgcatctgacccattttgagcttgaaggc
cttcgttgccttgtagataaattggagtctctgccactgcacaagaaatgtgtccctaca
gggatagaagacgaagatgctctcattgctgatgtgaagattttgctggaggagcttgcc
agcagtgatcccaagttagctctcacaggagttcctatagtacagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggttcctaccatccccattacaaagcct
cacactatgaaaccagctccacggttaacacctgtgaggccagctgctgcctcccccata
gtgtcaggagccaggcggagacgagtgcgatgtcgaaaatgcaaggcctgtgtgcaagga
gagtgtggcgtttgccactactgcagggacatgaagaagttcgggggacctggtcgtatg
aagcagtcctgtgtccttcggcagtgcttggcacccagactgcctcactcggtcacgtgt
tccctctgtggagaggtggatcagaatgaggagacgcaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaagacagc
tcagagaaggcccagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcgcccacc
tccatgctgcagctcatccacgacccggcctccccccggggcgtggtgactcggtcatcc
cctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctacggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaacctgcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggacgaggaggggctggggggagatgaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgtgacaagagactttggacaaaaattgacttgagtagatgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagcctcgacctcagt
tggaccaacatctccaaaaaacaactgacgtggctcgtcaacaggctgccagggctgaaa
gacctcctcctagcaggctgttcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataagccaggtcaggacaatcgtagcaagctccggaac
atgactgacttccggctggcaggcctcgacatcacggatgccacgcttcgcctcatcatt
cgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctgacggatcag
tcctccaatctgctcactgctgtcgggtcttccactcgttactccctcacagagctcaac
atggcaggttgcaataaattgacagaccagaccctgatctacctacggcgcatcgccaac
gtcaccttgattgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttatccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
DBGET
integrated database retrieval system
